UNAFold

Hi there, I have the similar question. I hope different colors can be used when visualizing as jpg file. I have found this option using command line: Usage: sir_graph [options] infile[.ct] | infile.ss -col <color_file> (User supplied color file.) -col_ann <color_ann_file> (As above for annotation co...

Thank you so much! I am contacting our IT support department to install the binary.

Version as below sir_graph: mfold_util 4.7 (UNAFold®) 3.9 Installed on a CentOS Linux release 7.9 cluster. Had to load `libgd/2.2.4` module to visualize ".ct" files. The issue occurred when I run lots of plotting tasks in a short period of time by using a loop. Is there a restriction on ho...

Thank you Nick for the reply! Below is an example of a ".ct" file that had "Segmentation fault" issue 22 dG = 0.376 align_fp 1 g 0 2 0 1 0 0 2 c 1 3 0 2 0 0 3 g 2 4 0 3 0 0 4 a 3 5 0 4 0 0 5 a 4 6 0 5 0 6 6 a 5 7 13 6 5 7 7 t 6 8 12 7 6 0 8 g 7 9 0 8 0 0 9 a 8 10 0 9 0 0 10 a 9 1...

To whom it may concern, The UNAFold tool is a wonderful help for my research and development. I have recently encountered the following issue when plotting for ".ct" files using the command line. The issue happened for some ".ct" file, not all. The linux terminal version of the t...