Thermodynamics of Folding

Structure 1
26Apr20-05-39-00
ΔG = -40.20

Structural elementδGInformation
External loop -2.10 44 ss bases & 3 closing helices.
Stack -1.10External closing pair is A 83-U 151
Stack -2.40External closing pair is U 84-A 150
Stack -2.10External closing pair is C 85-G 149
Helix -5.60 4 base pairs.
Interior loop 4.10External closing pair is U 86-A 148
Stack -2.10External closing pair is A 90-U 146
Stack -3.40External closing pair is G 91-C 145
Stack -2.10External closing pair is C 92-G 144
Stack -2.10External closing pair is A 93-U 143
Stack -2.50External closing pair is G 94-C 142
Helix -12.20 6 base pairs.
Bulge loop 4.10External closing pair is U 95-G 141
Stack -3.40External closing pair is G 100-C 140
Helix -3.40 2 base pairs.
Interior loop 0.40External closing pair is C 101-G 139
Stack -2.10External closing pair is C 103-G 137
Stack -1.10External closing pair is A 104-U 136
Stack -2.10External closing pair is U 105-A 135
Helix -5.30 4 base pairs.
Interior loop 1.10External closing pair is G 106-C 134
Stack -3.30External closing pair is G 109-C 131
Helix -3.30 2 base pairs.
Interior loop 0.30External closing pair is G 110-C 130
Stack -3.30External closing pair is G 112-C 128
Stack -2.50External closing pair is G 113-C 127
Helix -5.80 3 base pairs.
Interior loop 1.10External closing pair is U 114-G 126
Stack -2.50External closing pair is G 116-C 124
Stack -1.40External closing pair is U 117-G 123
Helix -3.90 3 base pairs.
Hairpin loop 5.70Closing pair is G 118-C 122
Stack -3.40External closing pair is G 55-C 81
Stack -3.30External closing pair is C 56-G 80
Helix -6.70 3 base pairs.
Bulge loop 0.50External closing pair is C 57-G 79
Stack -2.40External closing pair is C 58-G 77
Stack -3.30External closing pair is G 59-C 76
Stack -3.40External closing pair is G 60-C 75
Helix -9.10 4 base pairs.
Bulge loop 3.60External closing pair is C 61-G 74
Stack -3.40External closing pair is G 66-C 73
Helix -3.40 2 base pairs.
Hairpin loop 3.60Closing pair is C 67-G 72
Stack -3.30External closing pair is G 36-C 52
Stack -3.30External closing pair is G 37-C 51
Stack -2.20External closing pair is G 38-C 50
Helix -8.80 4 base pairs.
Bulge loop 2.90External closing pair is U 39-A 49
Stack -2.10External closing pair is U 40-A 47
Helix -2.10 2 base pairs.
Hairpin loop 4.10Closing pair is G 41-C 46