Thermodynamics of Folding

Structure 1
tRNA_Ile_AAT
ΔG = -27.70

Structural elementδGInformation
External loop -1.70 4 ss bases & 1 closing helices.
Stack -3.40External closing pair is G 1-C 72
Stack -3.30External closing pair is C 2-G 71
Stack -2.40External closing pair is C 3-G 70
Stack -3.30External closing pair is G 4-C 69
Stack -2.50External closing pair is G 5-C 68
Helix -14.90 6 base pairs.
Multi-loop 1.30External closing pair is U 6-G 67
11 ss bases & 4 closing helices.
Stack -1.50External closing pair is G 49-C 64
Stack -2.10External closing pair is G 50-U 63
Stack -3.30External closing pair is G 51-C 62
Stack -1.50External closing pair is G 52-C 61
Helix -8.40 5 base pairs.
Hairpin loop 2.80Closing pair is G 53-U 60
Stack -2.20External closing pair is A 27-U 43
Stack -2.10External closing pair is C 28-G 42
Stack -2.10External closing pair is U 29-A 41
Stack -2.40External closing pair is G 30-C 40
Helix -8.80 5 base pairs.
Hairpin loop 5.80Closing pair is A 31-U 39
Stack -3.40External closing pair is G 10-C 25
Stack -2.10External closing pair is C 11-G 24
Stack -2.40External closing pair is U 12-A 23
Helix -7.90 4 base pairs.
Hairpin loop 4.10Closing pair is C 13-G 22