Thermodynamics of Folding

Structure 1
26Feb28-23-36-42
ΔG = -25.90

Structural elementδGInformation
External loop -1.20 10 ss bases & 1 closing helices.
Stack -3.30External closing pair is G 2-C 60
Stack -1.50External closing pair is G 3-C 59
Stack -2.10External closing pair is G 4-U 58
Stack -3.30External closing pair is G 5-C 57
Helix -10.20 5 base pairs.
Interior loop 3.20External closing pair is G 6-C 56
Stack -1.00External closing pair is U 9-A 54
Stack -2.50External closing pair is G 10-U 53
Helix -3.50 3 base pairs.
Bulge loop 0.50External closing pair is C 11-G 52
Stack -2.10External closing pair is C 12-G 50
Stack -0.90External closing pair is U 13-A 49
Stack -2.10External closing pair is U 14-A 48
Helix -5.10 4 base pairs.
Interior loop 0.60External closing pair is G 15-C 47
Stack -2.40External closing pair is G 18-C 44
Stack -0.90External closing pair is A 19-U 43
Stack -1.10External closing pair is A 20-U 42
Helix -4.40 4 base pairs.
Interior loop 1.90External closing pair is U 21-A 41
Stack -1.40External closing pair is C 25-G 38
Stack -2.10External closing pair is G 26-U 37
Stack -2.20External closing pair is G 27-C 36
Stack -2.40External closing pair is U 28-A 35
Helix -8.10 5 base pairs.
Hairpin loop 0.40Closing pair is C 29-G 34