Thermodynamics of Folding

Structure 1
26Feb28-23-44-31
ΔG = -23.80

Structural elementδGInformation
External loop -1.30 5 ss bases & 1 closing helices.
Stack -2.10External closing pair is C 1-G 72
Stack -2.40External closing pair is U 2-A 71
Helix -4.50 3 base pairs.
Interior loop 1.10External closing pair is C 3-G 70
Stack -0.90External closing pair is A 5-U 68
Stack -1.10External closing pair is A 6-U 67
Stack -2.40External closing pair is U 7-A 66
Stack -2.10External closing pair is C 8-G 65
Stack -2.10External closing pair is A 9-U 64
Helix -8.60 6 base pairs.
Interior loop 2.30External closing pair is G 10-C 63
Stack -1.00External closing pair is U 14-G 58
Stack -1.40External closing pair is A 15-U 57
Stack -1.50External closing pair is U 16-G 56
Stack -2.10External closing pair is C 17-G 55
Stack -0.90External closing pair is A 18-U 54
Stack -0.90External closing pair is A 19-U 53
Stack -2.20External closing pair is A 20-U 52
Helix -10.00 8 base pairs.
Bulge loop 3.30External closing pair is C 21-G 51
Stack -1.40External closing pair is G 22-U 48
Stack -1.30External closing pair is U 23-A 47
Stack -2.20External closing pair is A 24-U 46
Stack -3.30External closing pair is C 25-G 45
Helix -8.20 5 base pairs.
Bulge loop 3.20External closing pair is C 26-G 44
Stack -3.30External closing pair is C 30-G 43
Stack -2.40External closing pair is C 31-G 42
Helix -5.70 3 base pairs.
Hairpin loop 4.60Closing pair is G 32-C 41