Thermodynamics of Folding

Structure 1
26Feb28-23-47-36
ΔG = -19.60

Structural elementδGInformation
External loop -0.50 10 ss bases & 1 closing helices.
Stack -0.90External closing pair is A 2-U 65
Stack -1.10External closing pair is A 3-U 64
Stack -2.40External closing pair is U 4-A 63
Stack -2.10External closing pair is C 5-G 62
Stack -2.10External closing pair is A 6-U 61
Helix -8.60 6 base pairs.
Interior loop 2.30External closing pair is G 7-C 60
Stack -1.00External closing pair is U 11-G 55
Stack -1.40External closing pair is A 12-U 54
Stack -1.50External closing pair is U 13-G 53
Stack -2.10External closing pair is C 14-G 52
Stack -0.90External closing pair is A 15-U 51
Stack -0.90External closing pair is A 16-U 50
Stack -2.20External closing pair is A 17-U 49
Helix -10.00 8 base pairs.
Bulge loop 3.30External closing pair is C 18-G 48
Stack -1.40External closing pair is G 19-U 45
Stack -1.30External closing pair is U 20-A 44
Stack -2.20External closing pair is A 21-U 43
Stack -3.30External closing pair is C 22-G 42
Helix -8.20 5 base pairs.
Bulge loop 3.20External closing pair is C 23-G 41
Stack -3.30External closing pair is C 27-G 40
Stack -2.40External closing pair is C 28-G 39
Helix -5.70 3 base pairs.
Hairpin loop 4.60Closing pair is G 29-C 38