Structure 1
26Mar01-00-04-00
ΔG = -70.90

Structural element	δG	Information
External loop	-0.20	8 ss bases & 2 closing helices.
Stack	-1.10	External closing pair is A 116-U 215
Stack	-1.30	External closing pair is U 117-A 214
Stack	-0.90	External closing pair is A 118-U 213
Helix	-3.30	4 base pairs.
Interior loop	-0.40	External closing pair is A 119-U 212
Stack	-1.30	External closing pair is U 121-A 210
Stack	-1.10	External closing pair is A 122-U 209
Stack	-2.40	External closing pair is U 123-A 208
Stack	-2.10	External closing pair is C 124-G 207
Stack	-0.90	External closing pair is U 125-A 206
Helix	-7.80	6 base pairs.
Interior loop	3.00	External closing pair is U 126-A 205
Stack	-2.10	External closing pair is A 129-U 201
Helix	-2.10	2 base pairs.
Bulge loop	1.40	External closing pair is G 130-C 200
Stack	-0.90	External closing pair is A 132-U 199
Stack	-2.10	External closing pair is A 133-U 198
Stack	-2.40	External closing pair is G 134-C 197
Stack	-0.60	External closing pair is A 135-U 196
Stack	-2.10	External closing pair is G 136-U 195
Helix	-8.10	6 base pairs.
Interior loop	-1.00	External closing pair is G 137-C 194
Stack	-0.90	External closing pair is A 139-U 192
Stack	-1.40	External closing pair is A 140-U 191
Stack	-1.00	External closing pair is U 141-G 190
Stack	-0.60	External closing pair is A 142-U 189
Stack	-2.10	External closing pair is G 143-U 188
Helix	-6.00	6 base pairs.
Interior loop	-4.40	External closing pair is G 144-C 187
Interior loop	1.10	External closing pair is G 147-C 184
Stack	-0.90	External closing pair is A 149-U 182
Stack	-0.90	External closing pair is A 150-U 181
Stack	-0.90	External closing pair is A 151-U 180
Stack	-0.90	External closing pair is A 152-U 179
Stack	-0.90	External closing pair is A 153-U 178
Helix	-4.50	6 base pairs.
Interior loop	1.70	External closing pair is A 154-U 177
Stack	-0.90	External closing pair is A 156-U 175
Stack	-0.90	External closing pair is A 157-U 174
Stack	-2.10	External closing pair is A 158-U 173
Stack	-2.40	External closing pair is G 159-C 172
Stack	-0.60	External closing pair is A 160-U 171
Stack	-1.30	External closing pair is G 161-U 170
Stack	-1.40	External closing pair is A 162-U 169
Helix	-9.60	8 base pairs.
Hairpin loop	5.00	Closing pair is U 163-G 168
Stack	-2.10	External closing pair is U 1-A 109
Stack	-3.30	External closing pair is G 2-C 108
Helix	-5.40	3 base pairs.
Multi-loop	3.80	External closing pair is G 3-C 107 5 ss bases & 3 closing helices.
Stack	-2.50	External closing pair is G 59-U 104
Stack	-2.10	External closing pair is C 60-G 103
Stack	-2.10	External closing pair is A 61-U 102
Stack	-3.40	External closing pair is G 62-C 101
Helix	-10.10	5 base pairs.
Interior loop	1.10	External closing pair is C 63-G 100
Stack	-2.40	External closing pair is G 65-C 98
Stack	-0.60	External closing pair is A 66-U 97
Stack	-1.30	External closing pair is G 67-U 96
Helix	-4.30	4 base pairs.
Interior loop	0.90	External closing pair is A 68-U 95
Stack	-3.30	External closing pair is C 71-G 92
Helix	-3.30	2 base pairs.
Interior loop	0.40	External closing pair is C 72-G 91
Stack	-2.40	External closing pair is G 74-C 89
Stack	-0.90	External closing pair is A 75-U 88
Stack	-0.90	External closing pair is A 76-U 87
Stack	-0.90	External closing pair is A 77-U 86
Stack	-0.90	External closing pair is A 78-U 85
Helix	-6.00	6 base pairs.
Hairpin loop	3.00	Closing pair is A 79-U 84
Stack	-2.40	External closing pair is C 7-G 58
Stack	-3.30	External closing pair is G 8-C 57
Helix	-5.70	3 base pairs.
Bulge loop	1.40	External closing pair is G 9-C 56
Stack	-0.60	External closing pair is A 10-U 54
Stack	-1.40	External closing pair is G 11-U 53
Stack	-2.10	External closing pair is U 12-A 52
Stack	-3.40	External closing pair is G 13-C 51
Helix	-7.50	5 base pairs.
Interior loop	2.70	External closing pair is C 14-G 50
Stack	-2.10	External closing pair is C 16-G 46
Stack	-2.10	External closing pair is U 17-A 45
Helix	-4.20	3 base pairs.
Interior loop	1.10	External closing pair is G 18-C 44
Stack	-2.40	External closing pair is U 20-A 42
Stack	-2.10	External closing pair is C 21-G 41
Stack	-0.90	External closing pair is A 22-U 40
Stack	-0.60	External closing pair is A 23-U 39
Stack	-1.30	External closing pair is G 24-U 38
Stack	-0.60	External closing pair is A 25-U 37
Helix	-7.90	7 base pairs.
Bulge loop	1.70	External closing pair is G 26-U 36
Stack	-2.50	External closing pair is G 28-C 35
Helix	-2.50	2 base pairs.
Hairpin loop	5.10	Closing pair is U 29-G 34

---