Thermodynamics of Folding
Structure 2
dzf
ΔG = -36.60
dzf
ΔG = -36.60
| Structural element | δG | Information |
|---|---|---|
| External loop | 0.00 | 4 ss bases & 1 closing helices. |
| Stack | -1.50 | External closing pair is G 5-C 230 |
| Stack | -2.50 | External closing pair is G 6-U 229 |
| Stack | -2.40 | External closing pair is C 7-G 228 |
| Stack | -2.20 | External closing pair is G 8-C 227 |
| Stack | -2.40 | External closing pair is U 9-A 226 |
| Helix | -11.00 | 6 base pairs. |
| Multi-loop | 0.70 | External closing pair is C 10-G 225 13 ss bases & 3 closing helices. |
| Stack | -3.30 | External closing pair is G 124-C 222 |
| Stack | -2.20 | External closing pair is G 125-C 221 |
| Stack | -0.90 | External closing pair is U 126-A 220 |
| Stack | -2.10 | External closing pair is U 127-A 219 |
| Helix | -8.50 | 5 base pairs. |
| Interior loop | 0.90 | External closing pair is G 128-C 218 |
| Stack | -3.30 | External closing pair is G 132-C 214 |
| Stack | -2.20 | External closing pair is G 133-C 213 |
| Helix | -5.50 | 3 base pairs. |
| Interior loop | 2.90 | External closing pair is U 134-A 212 |
| Stack | -3.40 | External closing pair is G 142-C 204 |
| Stack | -2.10 | External closing pair is C 143-G 203 |
| Stack | -1.30 | External closing pair is U 144-A 202 |
| Stack | -0.60 | External closing pair is U 145-G 201 |
| Stack | -2.40 | External closing pair is U 146-A 200 |
| Helix | -9.80 | 6 base pairs. |
| Interior loop | 1.10 | External closing pair is C 147-G 199 |
| Stack | -2.40 | External closing pair is U 149-A 197 |
| Helix | -2.40 | 2 base pairs. |
| Interior loop | 1.80 | External closing pair is C 150-G 196 |
| Stack | -2.10 | External closing pair is C 158-G 188 |
| Stack | -0.90 | External closing pair is U 159-A 187 |
| Stack | -1.30 | External closing pair is U 160-A 186 |
| Helix | -4.30 | 4 base pairs. |
| Interior loop | 2.00 | External closing pair is U 161-G 185 |
| Stack | -0.90 | External closing pair is A 164-U 182 |
| Stack | -0.90 | External closing pair is A 165-U 181 |
| Stack | -1.10 | External closing pair is A 166-U 180 |
| Helix | -2.90 | 4 base pairs. |
| Hairpin loop | 6.10 | Closing pair is U 167-A 179 |
| Stack | -0.90 | External closing pair is U 21-A 122 |
| Stack | -2.40 | External closing pair is U 22-A 121 |
| Stack | -3.30 | External closing pair is C 23-G 120 |
| Helix | -6.60 | 4 base pairs. |
| Multi-loop | 1.80 | External closing pair is C 24-G 119 35 ss bases & 3 closing helices. |
| Stack | -2.10 | External closing pair is C 43-G 88 |
| Stack | -1.10 | External closing pair is A 44-U 87 |
| Helix | -3.20 | 3 base pairs. |
| Interior loop | 1.70 | External closing pair is U 45-A 86 |
| Stack | -2.10 | External closing pair is A 47-U 84 |
| Stack | -2.50 | External closing pair is G 48-C 83 |
| Helix | -4.60 | 3 base pairs. |
| Interior loop | 3.90 | External closing pair is U 49-G 82 |
| Stack | -2.40 | External closing pair is G 56-C 71 |
| Stack | -2.10 | External closing pair is A 57-U 70 |
| Helix | -4.50 | 3 base pairs. |
| Hairpin loop | 4.10 | Closing pair is G 58-C 69 |
| Stack | -0.60 | External closing pair is A 26-U 38 |
| Stack | -2.50 | External closing pair is G 27-U 37 |
| Stack | -2.10 | External closing pair is C 28-G 36 |
| Stack | -1.30 | External closing pair is U 29-A 35 |
| Helix | -6.50 | 5 base pairs. |
| Hairpin loop | 6.20 | Closing pair is A 30-U 34 |