Thermodynamics of Folding
Structure 3
tRNA_Ile_AAT
ΔG = -23.40
tRNA_Ile_AAT
ΔG = -23.40
| Structural element | δG | Information |
|---|---|---|
| External loop | -1.70 | 1 ss bases & 1 closing helices. |
| Stack | -3.30 | External closing pair is G 1-C 73 |
| Stack | -3.40 | External closing pair is G 2-C 72 |
| Stack | -3.30 | External closing pair is C 3-G 71 |
| Helix | -10.00 | 4 base pairs. |
| Interior loop | -1.40 | External closing pair is C 4-G 70 |
| Stack | -2.20 | External closing pair is G 6-C 68 |
| Helix | -2.20 | 2 base pairs. |
| Multi-loop | 2.20 | External closing pair is U 7-A 67 9 ss bases & 4 closing helices. |
| Stack | -1.50 | External closing pair is G 46-C 61 |
| Stack | -1.40 | External closing pair is G 47-U 60 |
| Stack | -2.40 | External closing pair is U 48-A 59 |
| Stack | -2.40 | External closing pair is C 49-G 58 |
| Helix | -7.70 | 5 base pairs. |
| Hairpin loop | 4.90 | Closing pair is G 50-C 57 |
| Stack | -2.10 | External closing pair is U 28-A 44 |
| Stack | -3.30 | External closing pair is G 29-C 43 |
| Stack | -2.50 | External closing pair is G 30-C 42 |
| Stack | -1.40 | External closing pair is U 31-G 41 |
| Helix | -9.30 | 5 base pairs. |
| Hairpin loop | 4.80 | Closing pair is G 32-C 40 |
| Stack | -3.40 | External closing pair is G 10-C 26 |
| Stack | -2.10 | External closing pair is C 11-G 25 |
| Stack | -2.40 | External closing pair is U 12-A 24 |
| Helix | -7.90 | 4 base pairs. |
| Hairpin loop | 4.90 | Closing pair is C 13-G 23 |