Thermodynamics of Folding

Structure 31
26Apr20-05-44-46
ΔG = -11.80

Structural elementδGInformation
External loop -0.20 16 ss bases & 1 closing helices.
Stack -0.60External closing pair is U 15-G 90
Stack -1.30External closing pair is U 16-A 89
Stack -1.10External closing pair is A 17-U 88
Stack -1.30External closing pair is U 18-A 87
Stack -1.00External closing pair is U 19-G 86
Helix -5.30 6 base pairs.
Multi-loop 4.00External closing pair is A 20-U 85
3 ss bases & 3 closing helices.
Stack -0.60External closing pair is A 37-U 84
Stack -1.30External closing pair is G 38-U 83
Stack -1.40External closing pair is A 39-U 82
Stack -1.00External closing pair is U 40-G 81
Stack -1.10External closing pair is A 41-U 80
Stack -1.30External closing pair is U 42-A 79
Helix -6.70 7 base pairs.
Bulge loop 4.60External closing pair is U 43-G 78
Stack -2.40External closing pair is U 48-A 77
Stack -2.10External closing pair is C 49-G 76
Stack -1.40External closing pair is U 50-G 75
Helix -5.90 4 base pairs.
Bulge loop 2.80External closing pair is G 51-C 74
Stack -2.40External closing pair is G 54-C 73
Stack -2.10External closing pair is A 55-U 72
Helix -4.50 3 base pairs.
Bulge loop 3.30External closing pair is G 56-C 71
Stack -1.30External closing pair is G 59-U 70
Stack -2.10External closing pair is A 60-U 69
Stack -2.50External closing pair is G 61-C 68
Helix -5.90 4 base pairs.
Hairpin loop 5.30Closing pair is U 62-G 67
Stack -1.50External closing pair is G 23-C 35
Stack -2.50External closing pair is G 24-U 34
Stack -3.30External closing pair is C 25-G 33
Helix -7.30 4 base pairs.
Hairpin loop 4.00Closing pair is C 26-G 32