Thermodynamics of Folding

Structure 4
26Apr19-23-19-03
ΔG = -84.50

Structural elementδGInformation
External loop -1.70 3 ss bases & 1 closing helices.
Stack -3.30External closing pair is G 1-C 205
Stack -3.30External closing pair is G 2-C 204
Helix -6.60 3 base pairs.
Interior loop 2.00External closing pair is G 3-C 203
Stack -3.30External closing pair is G 8-C 199
Helix -3.30 2 base pairs.
Interior loop -0.10External closing pair is G 9-C 198
Interior loop -3.10External closing pair is G 11-C 196
Stack -1.40External closing pair is U 14-G 193
Stack -3.30External closing pair is G 15-C 192
Stack -3.30External closing pair is G 16-C 191
Stack -3.40External closing pair is G 17-C 190
Stack -3.30External closing pair is C 18-G 189
Helix -14.70 6 base pairs.
Multi-loop 1.10External closing pair is C 19-G 188
13 ss bases & 3 closing helices.
Stack -2.10External closing pair is A 164-U 184
Stack -3.40External closing pair is G 165-C 183
Helix -5.50 3 base pairs.
Interior loop 1.60External closing pair is C 166-G 182
Stack -2.20External closing pair is A 169-U 179
Stack -2.10External closing pair is C 170-G 178
Helix -4.30 3 base pairs.
Hairpin loop 5.30Closing pair is A 171-U 177
Stack -2.40External closing pair is G 23-C 156
Stack -0.60External closing pair is A 24-U 155
Helix -3.00 3 base pairs.
Interior loop -1.00External closing pair is G 25-U 154
Stack -3.30External closing pair is G 27-C 152
Stack -2.20External closing pair is G 28-C 151
Stack -2.10External closing pair is U 29-A 150
Stack -3.30External closing pair is G 30-C 149
Helix -10.90 5 base pairs.
Interior loop 1.20External closing pair is G 31-C 148
Stack -3.30External closing pair is G 33-C 145
Stack -3.40External closing pair is G 34-C 144
Helix -6.70 3 base pairs.
Multi-loop 2.70External closing pair is C 35-G 143
13 ss bases & 3 closing helices.
Stack -3.40External closing pair is G 73-C 137
Stack -3.30External closing pair is C 74-G 136
Stack -2.40External closing pair is C 75-G 135
Helix -9.10 4 base pairs.
Interior loop 1.20External closing pair is G 76-C 134
Stack -3.40External closing pair is G 78-C 131
Stack -2.10External closing pair is C 79-G 130
Stack -0.90External closing pair is U 80-A 129
Stack -0.90External closing pair is U 81-A 128
Stack -0.90External closing pair is U 82-A 127
Helix -8.20 6 base pairs.
Bulge loop 4.50External closing pair is U 83-A 126
Stack -3.30External closing pair is C 89-G 125
Stack -2.40External closing pair is C 90-G 124
Stack -3.40External closing pair is G 91-C 123
Helix -9.10 4 base pairs.
Interior loop -1.70External closing pair is C 92-G 122
Stack -2.40External closing pair is C 94-G 120
Stack -3.40External closing pair is G 95-C 119
Stack -2.10External closing pair is C 96-G 118
Stack -2.10External closing pair is U 97-A 117
Helix -10.00 5 base pairs.
Interior loop 2.30External closing pair is G 98-C 116
Stack -2.40External closing pair is U 103-A 111
Helix -2.40 2 base pairs.
Hairpin loop 3.60Closing pair is C 104-G 110
Stack -2.50External closing pair is G 44-C 72
Stack -1.50External closing pair is U 45-G 71
Stack -2.10External closing pair is C 46-G 70
Stack -1.30External closing pair is U 47-A 69
Helix -7.40 5 base pairs.
Interior loop 2.40External closing pair is A 48-U 68
Stack -3.30External closing pair is C 50-G 65
Stack -3.30External closing pair is C 51-G 64
Stack -2.10External closing pair is C 52-G 63
Helix -8.70 4 base pairs.
Hairpin loop 5.10Closing pair is U 53-A 62