Thermodynamics of Folding

Structure 4
26Apr20-05-56-11
ΔG = -25.60

Structural elementδGInformation
External loop -0.20 7 ss bases & 1 closing helices.
Stack -0.90External closing pair is A 1-U 85
Stack -0.90External closing pair is A 2-U 84
Stack -0.90External closing pair is A 3-U 83
Stack -2.20External closing pair is A 4-U 82
Stack -2.10External closing pair is C 5-G 81
Stack -1.10External closing pair is A 6-U 80
Stack -2.40External closing pair is U 7-A 79
Stack -2.10External closing pair is C 8-G 78
Stack -2.40External closing pair is U 9-A 77
Stack -3.30External closing pair is C 10-G 76
Helix -18.30 11 base pairs.
Multi-loop 3.30External closing pair is C 11-G 75
5 ss bases & 3 closing helices.
Stack -3.30External closing pair is G 27-C 74
Helix -3.30 2 base pairs.
Interior loop 1.10External closing pair is G 28-C 73
Stack -0.50External closing pair is G 31-U 70
Stack -2.10External closing pair is G 32-U 69
Stack -2.50External closing pair is G 33-C 68
Stack -1.50External closing pair is U 34-G 67
Stack -3.30External closing pair is C 35-G 66
Stack -2.10External closing pair is C 36-G 65
Helix -12.00 7 base pairs.
Interior loop -0.40External closing pair is A 37-U 64
Stack -1.40External closing pair is A 39-U 62
Helix -1.40 2 base pairs.
Bulge loop 4.20External closing pair is U 40-G 61
Stack -1.40External closing pair is A 41-U 57
Stack -0.60External closing pair is U 42-G 56
Stack -2.40External closing pair is U 43-A 55
Stack -2.40External closing pair is C 44-G 54
Helix -6.80 5 base pairs.
Hairpin loop 4.40Closing pair is G 45-C 53
Stack -0.50External closing pair is U 15-G 24
Stack -1.00External closing pair is U 16-G 23
Helix -1.50 3 base pairs.
Hairpin loop 5.30Closing pair is A 17-U 22