Thermodynamics of Folding
Structure 4
26Apr20-05-59-44
ΔG = -79.30
26Apr20-05-59-44
ΔG = -79.30
| Structural element | δG | Information |
|---|---|---|
| External loop | -1.30 | 8 ss bases & 2 closing helices. |
| Stack | -3.40 | External closing pair is G 70-C 149 |
| Stack | -3.30 | External closing pair is C 71-G 148 |
| Stack | -2.40 | External closing pair is C 72-G 147 |
| Stack | -3.40 | External closing pair is G 73-C 146 |
| Stack | -2.10 | External closing pair is C 74-G 145 |
| Stack | -2.20 | External closing pair is A 75-U 144 |
| Helix | -16.80 | 7 base pairs. |
| Multi-loop | 0.10 | External closing pair is C 76-G 143 5 ss bases & 3 closing helices. |
| Stack | -2.40 | External closing pair is G 91-C 141 |
| Stack | -1.10 | External closing pair is A 92-U 140 |
| Stack | -2.10 | External closing pair is U 93-A 139 |
| Stack | -3.30 | External closing pair is G 94-C 138 |
| Helix | -8.90 | 5 base pairs. |
| Multi-loop | 1.60 | External closing pair is G 95-C 137 13 ss bases & 3 closing helices. |
| Stack | -2.10 | External closing pair is G 119-U 129 |
| Stack | -2.40 | External closing pair is G 120-C 128 |
| Stack | -1.10 | External closing pair is A 121-U 127 |
| Helix | -5.60 | 4 base pairs. |
| Hairpin loop | 6.20 | Closing pair is U 122-A 126 |
| Stack | -2.10 | External closing pair is C 99-G 115 |
| Helix | -2.10 | 2 base pairs. |
| Bulge loop | 1.40 | External closing pair is U 100-A 114 |
| Stack | -2.10 | External closing pair is C 102-G 113 |
| Stack | -2.10 | External closing pair is U 103-A 112 |
| Stack | -3.40 | External closing pair is G 104-C 111 |
| Helix | -7.60 | 4 base pairs. |
| Hairpin loop | 0.80 | Closing pair is C 105-G 110 |
| Stack | -3.30 | External closing pair is G 78-C 87 |
| Stack | -1.50 | External closing pair is G 79-C 86 |
| Helix | -4.80 | 3 base pairs. |
| Hairpin loop | 3.60 | Closing pair is G 80-U 85 |
| Stack | -2.40 | External closing pair is C 1-G 61 |
| Stack | -3.30 | External closing pair is G 2-C 60 |
| Stack | -3.40 | External closing pair is G 3-C 59 |
| Stack | -2.40 | External closing pair is C 4-G 58 |
| Stack | -3.30 | External closing pair is G 5-C 57 |
| Stack | -3.40 | External closing pair is G 6-C 56 |
| Stack | -2.40 | External closing pair is C 7-G 55 |
| Stack | -3.30 | External closing pair is G 8-C 54 |
| Stack | -3.40 | External closing pair is G 9-C 53 |
| Helix | -27.30 | 10 base pairs. |
| Bulge loop | 4.60 | External closing pair is C 10-G 52 |
| Stack | -3.30 | External closing pair is G 18-C 51 |
| Stack | -3.40 | External closing pair is G 19-C 50 |
| Stack | -2.40 | External closing pair is C 20-G 49 |
| Stack | -2.50 | External closing pair is G 21-C 48 |
| Helix | -11.60 | 5 base pairs. |
| Interior loop | 1.90 | External closing pair is U 22-G 47 |
| Stack | -3.40 | External closing pair is G 27-C 42 |
| Stack | -3.30 | External closing pair is C 28-G 41 |
| Stack | -2.10 | External closing pair is C 29-G 40 |
| Stack | -2.10 | External closing pair is U 30-A 39 |
| Stack | -3.40 | External closing pair is G 31-C 38 |
| Helix | -14.30 | 6 base pairs. |
| Hairpin loop | 0.80 | Closing pair is C 32-G 37 |