Thermodynamics of Folding

Structure 6
26Apr21-11-52-00
ΔG = -103.80

Structural elementδGInformation
External loop -0.70 10 ss bases & 2 closing helices.
Stack -2.10External closing pair is u 22-a 508
Stack -3.30External closing pair is g 23-c 507
Helix -5.40 3 base pairs.
Bulge loop 1.60External closing pair is g 24-c 506
Stack -0.90External closing pair is u 26-a 505
Stack -2.10External closing pair is u 27-a 504
Stack -2.40External closing pair is g 28-c 503
Stack -1.10External closing pair is a 29-u 502
Stack -2.40External closing pair is u 30-a 501
Helix -8.90 6 base pairs.
Multi-loop 1.80External closing pair is c 31-g 500
13 ss bases & 3 closing helices.
Stack -0.90External closing pair is u 48-a 494
Stack -1.30External closing pair is u 49-a 493
Stack -1.10External closing pair is a 50-u 492
Stack -1.30External closing pair is u 51-a 491
Helix -4.60 5 base pairs.
Interior loop 3.80External closing pair is a 52-u 490
Stack -2.10External closing pair is c 56-g 482
Stack -1.00External closing pair is u 57-a 481
Stack -2.50External closing pair is g 58-u 480
Stack -2.10External closing pair is c 59-g 479
Stack -1.10External closing pair is a 60-u 478
Stack -2.40External closing pair is u 61-a 477
Helix -11.20 7 base pairs.
Interior loop 1.60External closing pair is c 62-g 476
Stack -1.30External closing pair is u 66-a 472
Stack -2.20External closing pair is a 67-u 471
Helix -3.50 3 base pairs.
Bulge loop 1.70External closing pair is c 68-g 470
Stack -0.90External closing pair is a 69-u 468
Stack -2.20External closing pair is a 70-u 467
Helix -3.10 3 base pairs.
Multi-loop 2.20External closing pair is c 71-g 466
15 ss bases & 4 closing helices.
Stack -2.20External closing pair is a 215-u 460
Stack -2.10External closing pair is c 216-g 459
Stack -0.60External closing pair is u 217-g 458
Helix -4.90 4 base pairs.
Multi-loop 1.70External closing pair is u 218-a 457
18 ss bases & 3 closing helices.
Stack -2.10External closing pair is c 431-g 442
Stack -2.40External closing pair is u 432-a 441
Helix -4.50 3 base pairs.
Hairpin loop 3.20Closing pair is c 433-g 440
Stack -1.00External closing pair is u 221-a 428
Stack -2.10External closing pair is g 222-u 427
Helix -3.10 3 base pairs.
Bulge loop 0.50External closing pair is g 223-c 426
Stack -3.30External closing pair is g 225-c 425
Stack -2.20External closing pair is g 226-c 424
Helix -5.50 3 base pairs.
Interior loop 1.90External closing pair is u 227-a 423
Stack -0.90External closing pair is a 230-u 419
Stack -1.10External closing pair is a 231-u 418
Helix -2.00 3 base pairs.
Interior loop 1.50External closing pair is u 232-a 417
Stack -0.90External closing pair is u 235-a 414
Stack -0.90External closing pair is u 236-a 413
Stack -2.10External closing pair is u 237-a 412
Stack -2.40External closing pair is g 238-c 411
Stack -0.90External closing pair is a 239-u 410
Stack -0.90External closing pair is a 240-u 409
Helix -8.10 7 base pairs.
Interior loop 3.10External closing pair is a 241-u 408
Stack -1.30External closing pair is u 244-a 406
Stack -0.90External closing pair is a 245-u 405
Helix -2.20 3 base pairs.
Interior loop 1.70External closing pair is a 246-u 404
Stack -0.90External closing pair is u 248-a 402
Stack -1.30External closing pair is u 249-a 401
Stack -2.20External closing pair is a 250-u 400
Stack -2.10External closing pair is c 251-g 399
Helix -6.50 5 base pairs.
Bulge loop 3.80External closing pair is u 252-g 398
Stack -0.50External closing pair is g 255-u 397
Stack -2.50External closing pair is g 256-u 396
Stack -2.10External closing pair is c 257-g 395
Helix -5.10 4 base pairs.
Interior loop 1.70External closing pair is u 258-a 394
Stack -0.50External closing pair is u 260-g 392
Helix -0.50 2 base pairs.
Interior loop 0.90External closing pair is u 261-g 391
Stack -0.90External closing pair is u 264-a 388
Stack -2.10External closing pair is u 265-a 387
Helix -3.00 3 base pairs.
Bulge loop 3.30External closing pair is g 266-c 386
Stack -2.40External closing pair is u 269-a 385
Stack -3.30External closing pair is c 270-g 384
Stack -2.10External closing pair is c 271-g 383
Helix -7.80 4 base pairs.
Bulge loop 3.20External closing pair is a 272-u 382
Stack -0.50External closing pair is g 274-u 381
Stack -1.40External closing pair is g 275-u 380
Stack -1.30External closing pair is u 276-a 379
Stack -0.90External closing pair is a 277-u 378
Helix -4.10 5 base pairs.
Multi-loop 3.80External closing pair is a 278-u 377
13 ss bases & 3 closing helices.
Stack -1.30External closing pair is u 347-a 373
Stack -0.50External closing pair is u 348-g 372
Stack -0.60External closing pair is u 349-g 371
Stack -2.40External closing pair is u 350-a 370
Stack -2.10External closing pair is c 351-g 369
Stack -1.00External closing pair is u 352-a 368
Stack -0.50External closing pair is g 353-u 367
Stack -1.30External closing pair is g 354-u 366
Stack -2.10External closing pair is a 355-u 365
Helix -11.80 10 base pairs.
Hairpin loop 4.80Closing pair is g 356-c 364
Stack -2.10External closing pair is u 285-a 342
Stack -3.30External closing pair is g 286-c 341
Stack -2.20External closing pair is g 287-c 340
Stack -0.90External closing pair is u 288-a 339
Stack -0.90External closing pair is u 289-a 338
Stack -0.90External closing pair is u 290-a 337
Stack -1.30External closing pair is u 291-a 336
Stack -0.60External closing pair is u 292-g 335
Helix -12.20 9 base pairs.
Bulge loop 3.80External closing pair is u 293-a 334
Stack -0.90External closing pair is u 296-a 333
Stack -1.30External closing pair is u 297-a 332
Stack -2.10External closing pair is a 298-u 331
Stack -2.50External closing pair is g 299-c 330
Stack -1.00External closing pair is u 300-g 329
Stack -2.10External closing pair is a 301-u 328
Helix -9.90 7 base pairs.
Bulge loop 4.70External closing pair is g 302-c 327
Stack -2.40External closing pair is g 303-c 318
Stack -2.20External closing pair is a 304-u 317
Stack -2.10External closing pair is c 305-g 316
Stack -2.40External closing pair is u 306-a 315
Stack -2.10External closing pair is c 307-g 314
Helix -11.20 6 base pairs.
Hairpin loop 5.40Closing pair is u 308-g 313
Stack -0.90External closing pair is u 94-a 211
Stack -2.40External closing pair is u 95-a 210
Stack -2.10External closing pair is c 96-g 209
Stack -2.40External closing pair is u 97-a 208
Stack -3.30External closing pair is c 98-g 207
Helix -11.10 6 base pairs.
Interior loop 1.10External closing pair is c 99-g 206
Stack -0.90External closing pair is u 101-a 204
Stack -1.30External closing pair is u 102-a 203
Stack -1.10External closing pair is a 103-u 202
Stack -1.30External closing pair is u 104-a 201
Stack -0.60External closing pair is u 105-g 200
Stack -1.30External closing pair is u 106-a 199
Stack -0.90External closing pair is a 107-u 198
Stack -0.90External closing pair is a 108-u 197
Stack -1.10External closing pair is a 109-u 196
Helix -9.40 10 base pairs.
Multi-loop 1.90External closing pair is u 110-a 195
27 ss bases & 3 closing helices.
Stack -2.10External closing pair is g 149-u 191
Helix -2.10 2 base pairs.
Interior loop -0.30External closing pair is g 150-c 190
Stack -1.40External closing pair is g 153-u 187
Stack -2.10External closing pair is u 154-a 186
Stack -2.40External closing pair is g 155-c 185
Stack -0.90External closing pair is a 156-u 184
Helix -6.80 5 base pairs.
Interior loop 1.00External closing pair is a 157-u 183
Stack -2.10External closing pair is c 159-g 181
Stack -0.60External closing pair is a 160-u 180
Stack -1.40External closing pair is g 161-u 179
Helix -4.10 4 base pairs.
Interior loop 2.70External closing pair is u 162-a 178
Stack -2.20External closing pair is g 166-c 174
Helix -2.20 2 base pairs.
Hairpin loop 4.80Closing pair is u 167-a 173
Stack -2.40External closing pair is g 126-c 139
Stack -0.90External closing pair is a 127-u 138
Stack -0.90External closing pair is a 128-u 137
Helix -4.20 4 base pairs.
Hairpin loop 4.30Closing pair is a 129-u 136
Stack -2.10External closing pair is c 79-g 93
Stack -2.20External closing pair is a 80-u 92
Stack -2.10External closing pair is c 81-g 91
Stack -1.00External closing pair is u 82-g 90
Helix -7.40 5 base pairs.
Hairpin loop 4.50Closing pair is a 83-u 89
Stack -2.10External closing pair is u 33-a 40
Helix -2.10 2 base pairs.
Hairpin loop 3.50Closing pair is g 34-c 39
Stack -2.50External closing pair is g 3-u 15
Stack -2.10External closing pair is c 4-g 14
Helix -4.60 3 base pairs.
Hairpin loop 4.80Closing pair is a 5-u 13