Thermodynamics of Folding

Structure 9
26Apr20-05-56-11
ΔG = -23.40

Structural elementδGInformation
External loop -0.20 7 ss bases & 1 closing helices.
Stack -0.90External closing pair is A 1-U 85
Stack -0.90External closing pair is A 2-U 84
Stack -0.90External closing pair is A 3-U 83
Stack -2.20External closing pair is A 4-U 82
Stack -2.10External closing pair is C 5-G 81
Stack -1.10External closing pair is A 6-U 80
Stack -2.40External closing pair is U 7-A 79
Stack -2.10External closing pair is C 8-G 78
Stack -2.40External closing pair is U 9-A 77
Stack -3.30External closing pair is C 10-G 76
Helix -18.30 11 base pairs.
Multi-loop 2.90External closing pair is C 11-G 75
15 ss bases & 3 closing helices.
Stack -3.30External closing pair is G 65-C 74
Stack -1.50External closing pair is G 66-C 73
Helix -4.80 3 base pairs.
Hairpin loop 3.20Closing pair is G 67-U 72
Stack -1.40External closing pair is C 26-G 63
Helix -1.40 2 base pairs.
Interior loop -0.40External closing pair is G 27-U 62
Stack -2.40External closing pair is U 29-A 60
Helix -2.40 2 base pairs.
Interior loop 1.60External closing pair is C 30-G 59
Stack -2.40External closing pair is U 34-A 55
Helix -2.40 2 base pairs.
Bulge loop 2.80External closing pair is C 35-G 54
Stack -2.10External closing pair is C 36-G 51
Stack -2.10External closing pair is A 37-U 50
Stack -2.40External closing pair is G 38-C 49
Stack -1.10External closing pair is A 39-U 48
Stack -1.30External closing pair is U 40-A 47
Helix -9.00 6 base pairs.
Hairpin loop 5.00Closing pair is A 41-U 46