Circular RNA folding results on 26Apr20-05-59-44 for 116.236.209.193
Structure 1
Folding bases 1 to 149 of 26Apr20-05-59-44
Initial ΔG = -81.40
M. Zuker, Rensselaer Polytechnic Institute
Initial ΔG = -81.40
10 20 30
| CAAUCGU GUCG U
--CGGCGGCGGC GGCGU GCCUGC U
GCCGCCGCCG CCGCG CGGACG C
\ ^ ------- GUCA G
60 50 40
70 80
AAAAAAAA .-GA C
GCCGCACGGG CCAUC A
CGGCGUGCCU GGUAG G
-------- \ -- C
140 90
100
AUA--------------------- G U
CU CUGC U
GA GACG C
ACCAGCAAGAUCUAUAAUAGGAAC - G
130 120 110
Structure 2
Folding bases 1 to 149 of 26Apr20-05-59-44
Initial ΔG = -80.90
10 20 30
CAAUCGU GUCG U
--CGGCGGCGGC GGCGU GCCUGC U
GCCGCCGCCG CCGCG CGGACG C
\ ------- GUCA G
60 50 40
70 80
AAAAAAAA .-GA C
GCCGCACGGG CCAUC A
CGGCGUGCCU GGUAG G
-------- \ -- C
140 90
100
.-AUA G U
CU CUGC U
GA GACG C
\ --- - G
110
120
CAA-------| A
GGAU \
UCUA A
ACCAGCAAGA^ U
130
Structure 3
Folding bases 1 to 149 of 26Apr20-05-59-44
Initial ΔG = -79.90
10 20 30
CAAUCGU GUCG U
--CGGCGGCGGC GGCGU GCCUGC U
GCCGCCGCCG CCGCG CGGACG C
\ ------- GUCA G
60 50 40
70 80 90
AAAAAAAA .-GA .-A G
GCCGCACGGG CC UCCA C
CGGCGUGCCU GG AGGU G
-------- \ -- \ - A
140 120
100
UA- G U
CU CUGC U
GA GACG C
AAC - G
110
130
AUAAUA| UA
UC G
AG A
ACC---^ CA
Structure 4
Folding bases 1 to 149 of 26Apr20-05-59-44
Initial ΔG = -79.30
10 20 30
CAAUCGU GUCG U
--CGGCGGCGGC GGCGU GCCUGC U
GCCGCCGCCG CCGCG CGGACG C
\ ------- GUCA G
60 50 40
70 80
AAAAAAAA .-G A
GCCGCAC GGG C
CGGCGUG CCU C
-------- \ - A
90 100
AGC| .-AUA G U
GAUGG CU CUGC U
CUACC GA GACG C
C--^ \ --- - G
140 110
120
CAA---- A
GGAU \
UCUA A
AGCAAGA U
130
Structure 5
Folding bases 1 to 149 of 26Apr20-05-59-44
Initial ΔG = -77.40
10 20 30
CAAUCGU GUCG U
--CGGCGGCGGC GGCGU GCCUGC U
GCCGCCGCCG CCGCG CGGACG C
\ ------- GUCA G
60 50 40
70 80
AAAAAAAA AC
GCCGCACGG--GG \
CGGCGUGCC CC C
-------- \ UA
90 100
AGCGA-----| --------- G U
UGGAUA CU CUGC U
AUCUAU GA GACG C
UACCAGCAAG^ AAUAGGAAC - G
140 130 120 110
mfold version 3.6M. Zuker, Rensselaer Polytechnic Institute