RNA folding results on tRNA_Ile_AAT for 130.92.232.188

Structure 1 Folding bases 1 to 76 of tRNA_Ile_AAT
Initial ΔG = -27.70
              10       
----      .-GUA|   AAU 
    GCCGGU     GCUC   U
    CGGCCG     CGAG   G
ACCA      \ ---^   AUG 
     70            20  


                 30     
            .-A     CUU 
               ACUGA   \
               UGACU   G
            \ -     AAU 
                 40     


                   50      
              AGGUU     UU 
                   GGGGG  C
                   CUCCU  A
              UU---     GA 
                      60   


 

Structure 2 Folding bases 1 to 76 of tRNA_Ile_AAT
Initial ΔG = -27.10

          10       
GCC|    .-A    AAU 
   GGUGU   GCUC   U
   CCACG   CGAG   G
A--^    \ -    AUG 
               20  


               30     
          .-A     CUU 
             ACUGA   \
             UGACU   G
          \ -     AAU 
               40     


                  50      
            A   U-     UU 
             GGU  GGGGG  C
             CCG  CUCCU  A
            G   UU     GA 
           70        60   


 

Structure 3 Folding bases 1 to 76 of tRNA_Ile_AAT
Initial ΔG = -25.90

              10       
----      .-GUA    AAU 
    GCCGGU     GCUC   U
    CGGCCG     CGAG   G
ACCA      \ ---    AUG 
     70            20  


                 30         
            .-AACU|     UAA 
                  GACUUG   \
                  UUGGAU   U
            \ ----^     GAC 
                         40 


                50      
              --     UU 
                GGGGG  C
                CUCCU  A
              UU     GA 
                   60   


 

mfold version 3.6
M. Zuker, Rensselaer Polytechnic Institute