DNA folding results on RNaseP -61bp for 194.151.29.103
Structure 1
Folding bases 1 to 61 of RNaseP -61bp
dG = 0.65 dH = -29.10 dS = -86.70 Tm = 62.5 ℃
M. Zuker, Rensselaer Polytechnic Institute
dG = 0.65 dH = -29.10 dS = -86.70 Tm = 62.5 ℃
10 20 30 40
CCGGCCCAGCCACCATGGTGTCTTTGCTTTCCTGGTG| C CC
AGC CAT C
TCG GTA C
TGTT---------------------------------^ A TC
60 50
Structure 2
Folding bases 1 to 61 of RNaseP -61bp
dG = 0.83 dH = -27.70 dS = -83.14 Tm = 60.0 ℃
CC------------------------------------------------| C
GGC \
CCG C
TGTTTCGAGTATCCCCCTACCCGAGTGGTCCTTTCGTTTCTGTGGTACCA^ A
60 50 40 30 20 10
Structure 3
Folding bases 1 to 61 of RNaseP -61bp
dG = 0.86 dH = -22.00 dS = -66.62 Tm = 57.1 ℃
10
CCGGCCC-------------------------------| C C
AG CAC A
TC GTG T
TGTTTCGAGTATCCCCCTACCCGAGTGGTCCTTTCGTT^ T G
60 50 40 30 20
Structure 4
Folding bases 1 to 61 of RNaseP -61bp
dG = 0.95 dH = -42.70 dS = -127.20 Tm = 62.5 ℃
10 20
CCGGCCCAGC--------------| TGGTGTCT
CACCA \
GTGGT T
TGTTTCGAGTATCCCCCTACCCGA^ CCTTTCGT
60 50 40 30
Structure 5
Folding bases 1 to 61 of RNaseP -61bp
dG = 1.08 dH = -24.70 dS = -75.13 Tm = 55.6 ℃
10 20 30
CCGGCCCAGCCACCATGGTGTCTTTGCTTTCC| TG
TGG \
ACC A
TGTTTCGAGTATCCCCCT--------------^ CG
60 50 40
Structure 6
Folding bases 1 to 61 of RNaseP -61bp
dG = 1.17 dH = -17.80 dS = -55.28 Tm = 48.8 ℃
10
CCGGCCC--------------------------| CACCATG
AGC \
TCG G
TGTTTCGAGTATCCCCCTACCCGAGTGGTCCTT^ TTTCTGT
60 50 40 30 20
mfold version 3.6M. Zuker, Rensselaer Polytechnic Institute