DNA folding results on PLP-MKI67- 303 for 117.25.169.90
dG = -2.73 dH = -89.60 dS = -280.09 Tm = 46.7 ℃
10 20
.-TCTCTGTTGCGTAATC| G
AGT C
TCA G
\ ----------------^ A
30 40 50 60 70 80
ACTACTCTCTCTCAATTCTGCTACTGTACTTACCCACT CT C CGTCTATTT
AGAA TGT GATG \
TCTT ACG CTAC T
T------------------------------------- TC A CCCGAGGTC
110 100 90
Structure 2
Folding bases 1 to 112 of PLP-MKI67- 303
dG = -2.42 dH = -54.10 dS = -166.63 Tm = 51.5 ℃
10 20
.-TCTCTGTTGCGTAATC G
AGT C
TCA G
\ ---------------- A
30 40 50 60 70
ACTACTCTCTCTCAATTCTGCTACTGTACTTACCCA| CTTGTCGA
CTAGAA T
GGTCTT G
TTCTTTCACGACTACCCCGA----------------^ TTATCTGC
110 100 90 80
Structure 3
Folding bases 1 to 112 of PLP-MKI67- 303
dG = -2.13 dH = -96.50 dS = -304.27 Tm = 44.0 ℃
10
.-TCTCTGTTG| AT
CGTA \
GCGT C
\ ---------^ GA
20
30 40 50 60 70 80
AACTACTACTCTCTCTCAATTCTGCTACTGTACTTACCCACT CT C CGTCTATTT
AGAA TGT GATG \
TCTT ACG CTAC T
T----------------------------------------- TC A CCCGAGGTC
110 100 90
Structure 4
Folding bases 1 to 112 of PLP-MKI67- 303
dG = -1.92 dH = -152.20 dS = -484.54 Tm = 41.0 ℃
10 20 30
.-TCTCTGTTGCGTAAT| - - CTACTACT
CAGT GC GAA \
GTCA CG CTT C
\ ---------------^ T T AACTCTCT
50 40
60 70 80
TACTTACCCACT CT C CGTCTATTT
AGAA TGT GATG \
TCTT ACG CTAC T
T----------- TC A CCCGAGGTC
110 100 90
Structure 5
Folding bases 1 to 112 of PLP-MKI67- 303
dG = -1.86 dH = -64.20 dS = -201.00 Tm = 46.3 ℃
10 20
.-TCTCTGTTGCGTAATC G
AGT C
TCA G
\ ---------------- A
30 40 50 60 70
.-ACTACTCTCTCTCAATTCTGCTACTGTACTTACCCACT| ACTTGT
AGA \
TCT C
\ --------------------------------------^ GCGTAG
80
90
ATTTTCT------- A
GG G
CC C
TTCTTTCACGACTA C
110 100
Structure 6
Folding bases 1 to 112 of PLP-MKI67- 303
dG = -1.81 dH = -41.90 dS = -129.26 Tm = 51.0 ℃
10 20
.-TCTCTGTTGCGTAATC G
AGT C
TCA G
\ ---------------- A
30 40 50 60 70 80 90
ACTACTCTCTCTCAATTCTGCTACTGTACTTACCCACTAGAACTTGTCGATGCGTCTATTTT| GAGC
CTG \
GAC C
TTCTTTCAC-----------------------------------------------------^ TACC
110 100
Structure 7
Folding bases 1 to 112 of PLP-MKI67- 303
dG = -1.77 dH = -67.40 dS = -211.61 Tm = 45.4 ℃
10 20
.-TCTCTGTTGCGTAATC G
AGT C
TCA G
\ ---------------- A
30 40 50
.-ACTACTCTCTCTCAA| GCTACTGTA
TTCT \
AAGA C
\ ---------------^ TCACCCATT
60
70 80 90
CTTGTCGATGCGTCTATTTTCT A
GG G
CC C
TTCTTTCACGACTA-------- C
110 100
mfold version 3.6M. Zuker, Rensselaer Polytechnic Institute