Thermodynamics of Folding

Structure 2
26Apr19-23-19-03
ΔG = -85.00

Structural elementδGInformation
External loop -1.50 8 ss bases & 1 closing helices.
Stack -2.40External closing pair is C 7-G 206
Stack -3.30External closing pair is G 8-C 205
Helix -5.70 3 base pairs.
Bulge loop 0.50External closing pair is G 9-C 204
Stack -1.50External closing pair is G 11-C 203
Stack -2.10External closing pair is G 12-U 202
Helix -3.60 3 base pairs.
Bulge loop 0.50External closing pair is G 13-C 201
Stack -3.30External closing pair is G 15-C 200
Stack -3.30External closing pair is G 16-C 199
Stack -3.40External closing pair is G 17-C 198
Helix -10.00 4 base pairs.
Bulge loop 3.20External closing pair is C 18-G 197
Stack -1.50External closing pair is G 22-C 196
Stack -1.30External closing pair is G 23-U 195
Helix -2.80 3 base pairs.
Interior loop -1.00External closing pair is A 24-U 194
Stack -3.30External closing pair is G 26-C 192
Stack -3.30External closing pair is G 27-C 191
Stack -2.50External closing pair is G 28-C 190
Helix -9.10 4 base pairs.
Bulge loop 4.10External closing pair is U 29-G 189
Stack -2.10External closing pair is G 30-U 187
Helix -2.10 2 base pairs.
Interior loop -4.40External closing pair is G 31-C 186
Stack -3.40External closing pair is G 34-C 183
Helix -3.40 2 base pairs.
Bulge loop 3.20External closing pair is C 35-G 182
Stack -2.10External closing pair is C 36-G 178
Stack -1.10External closing pair is A 37-U 177
Stack -0.90External closing pair is U 38-A 176
Stack -0.90External closing pair is U 39-A 175
Stack -0.90External closing pair is U 40-A 174
Stack -0.90External closing pair is U 41-A 173
Stack -0.90External closing pair is U 42-A 172
Stack -2.10External closing pair is U 43-A 171
Stack -2.20External closing pair is G 44-C 170
Helix -12.00 10 base pairs.
Multi-loop 2.60External closing pair is U 45-A 169
15 ss bases & 3 closing helices.
Stack -2.50External closing pair is G 153-C 166
Stack -0.60External closing pair is U 154-G 165
Stack -2.40External closing pair is U 155-A 164
Helix -5.50 4 base pairs.
Hairpin loop 3.90Closing pair is C 156-G 163
Stack -2.10External closing pair is U 57-A 150
Helix -2.10 2 base pairs.
Bulge loop 0.50External closing pair is G 58-C 149
Stack -2.40External closing pair is G 60-C 148
Stack -0.90External closing pair is A 61-U 147
Stack -2.10External closing pair is A 62-U 146
Stack -3.30External closing pair is G 63-C 145
Helix -8.70 5 base pairs.
Bulge loop 0.40External closing pair is G 64-C 144
Stack -2.40External closing pair is C 66-G 143
Helix -2.40 2 base pairs.
Interior loop 0.90External closing pair is G 67-C 142
Stack -2.10External closing pair is G 70-U 139
Helix -2.10 2 base pairs.
Bulge loop 0.50External closing pair is G 71-C 138
Stack -3.40External closing pair is G 73-C 137
Stack -3.30External closing pair is C 74-G 136
Stack -2.40External closing pair is C 75-G 135
Helix -9.10 4 base pairs.
Interior loop 1.20External closing pair is G 76-C 134
Stack -3.40External closing pair is G 78-C 131
Stack -2.10External closing pair is C 79-G 130
Stack -0.90External closing pair is U 80-A 129
Stack -0.90External closing pair is U 81-A 128
Stack -0.90External closing pair is U 82-A 127
Helix -8.20 6 base pairs.
Bulge loop 4.50External closing pair is U 83-A 126
Stack -3.30External closing pair is C 89-G 125
Stack -2.40External closing pair is C 90-G 124
Stack -3.40External closing pair is G 91-C 123
Helix -9.10 4 base pairs.
Interior loop -1.70External closing pair is C 92-G 122
Stack -2.40External closing pair is C 94-G 120
Stack -3.40External closing pair is G 95-C 119
Stack -2.10External closing pair is C 96-G 118
Stack -2.10External closing pair is U 97-A 117
Helix -10.00 5 base pairs.
Interior loop 2.30External closing pair is G 98-C 116
Stack -2.40External closing pair is U 103-A 111
Helix -2.40 2 base pairs.
Hairpin loop 3.60Closing pair is C 104-G 110