3 prime UTR of N gene is the 491230th nucleic acid sequence folded on the Amazon hosted mfold server. - Sunday, April 19 23:51:19 UTC 2026 -

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Folding 3 prime UTR of N gene at 37° C. (3.6)
- Computed for 73.152.135.96 -

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Linear RNA folding at 5%, window = 3, max folds = 50 68 A's, 43 C's, 36 G's, 45 U/T's and 0 N's. 10 20 30 40 50 UUAAUUGCUA GCGAAAAUGC AAGAGCAAAG ACGAAAACAU GCCACACAUG 60 70 80 90 100 AGGAAUACCG AUUCUCUCAU UAACAUAUUC AGGCCAGUUA UCUGGGCUUA 110 120 130 140 150 AAAGCAGAAG UCCAACCCAG AUAACGAUCA UAUACAUGGU UCUCUCCAGA 160 170 180 190 200 GGUUCAUUAC UGAACACUCG UCCGAGAAUA ACGAGUAAGC UU

Output

The energy dot plot for 3 prime UTR of N gene. (Definition)
File formats: Text, PostScript, pdf, png, jpg

Computed Structures:   (File Formats)
The computed foldings contain 112 base pairs out of 158 (70.9%) in the energy dot plot.

Extra files:   sorted ct file;   h-num values;   p-num values;   log file for main computations.

Download all foldings

Choose zipped file: or gzipped tar file:   PostScriptPDFpngjpgctViennaRNAMLRnaViz ctMac ct RNAdrawXRNA ss  

View ss-count information

(Definition)   (ss-count file)  ss value = 3.35 ± 2.98

Averaging window   13579 1113151719 25517599   Magnification   Base to magnify about   Plot format   PostScriptPDFpngjpg  

View Individual Structures:

Circular structure Plots

◈ Structure 1 : Initial ΔG = -45.30 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 2 : Initial ΔG = -45.30 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 3 : Initial ΔG = -44.80 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 4 : Initial ΔG = -44.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 5 : Initial ΔG = -43.50 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 6 : Initial ΔG = -43.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 7 : Initial ΔG = -43.10 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

Dot plot folding comparisons for 3 prime UTR of N gene:
Image format: PostScriptpngjpg
Compare selected foldings:     1   2   3   4   5   6   7   All
     

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These computations were performed on ip-172-31-2-102 in 0 min. and 11.27 sec. and can be accessed at http://www.unafold.org/cgi-bin/view.cgi?26Apr19-23-51-17
The results will be erased in 6 hours..