p+b is the 434809th nucleic acid sequence folded on the Amazon hosted mfold server. - Sunday, March 01 03:18:11 UTC 2026 -

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Folding p+b at 25° C. (3.6)
[Na⁺] = 100 mM,     [Mg⁺⁺] = 1 mM, oligo correction
- Computed for 211.64.159.147 -

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Linear DNA folding at 5%, window = 2, max folds = 50 18 A's, 20 C's, 19 G's, 14 U/T's and 0 N's. 10 20 30 40 50 ACGACAGCCG AGTTGATTCA ACAGCCGAGT CGTCGACCAC TACGCATAGT 60 70 80 TTCTATCGCC AGGAAGGGTC G

Output

The energy dot plot for p+b. (Definition)
File formats: Text, PostScript, pdf, png, jpg

Computed Structures:   (File Formats)
The computed foldings contain 29 base pairs out of 37 (78.4%) in the energy dot plot.

Extra files:   sorted ct file;   h-num values;   p-num values;   log file for main computations.

Download all foldings

Choose zipped file: or gzipped tar file:   PostScriptPDFpngjpgctViennaRNAMLRnaViz ctMac ct RNAdrawXRNA ss  

View ss-count information

(Definition)   (ss-count file)  ss value = 0.96 ± 0.75

Averaging window   13579 1113151719 25517599   Magnification   Base to magnify about   Plot format   PostScriptPDFpngjpg  

View Individual Structures:

Circular structure Plots

◈ Structure 1 : ΔG = -8.12 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 2 : ΔG = -7.22 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

Dot plot folding comparison for p+b:
Image format: PostScriptpngjpg
Compare selected foldings:     1   2
     

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These computations were performed on ip-172-31-2-102 in 0 min. and 0.59 sec. and can be accessed at http://www.unafold.org/cgi-bin/view.cgi?26Mar01-03-18-11
The results will be erased in 6 hours..