dna_2353 is the 493727th nucleic acid sequence folded on the Amazon hosted mfold server. - Tuesday, April 21 06:43:11 UTC 2026 -

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Folding dna_2353 at 37° C. (3.6)
- Computed for 115.73.176.223 -

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Linear RNA folding at 5%, window = 5, max folds = 50 48 A's, 86 C's, 83 G's, 40 U/T's and 0 N's. 10 20 30 40 50 GUCUGCCUCA GCGUCGGCUU UACCCUCACC CCCCCAAUCG GGGGCGUGGA 60 70 80 90 100 CCUGGCAGUC CCGGUCGGCA ACGACCGGGU CCGCUGAAGA CCAGAGGCUC 110 120 130 140 150 GAGCAAGGAC CCACAUGGGA AAACAGUCUG GUAGGUGACC CGCGAGGGCG 160 170 180 190 200 CAUGCCACUG UUCGCCCGGA GACUUGCUGG AAGCCGGCAG GAAUCGCCGG 210 220 230 240 250 UCGCCCUUAG CGGGGCGCCC GUGCGACACA CCCUUUUCGA CCUGAGUUCA 260 GGCAAGA

Output

The energy dot plot for dna_2353. (Definition)
File formats: Text, PostScript, pdf, png, jpg

Computed Structures:   (File Formats)
The computed foldings contain 192 base pairs out of 600 (32.0%) in the energy dot plot.

Extra files:   sorted ct file;   h-num values;   p-num values;   log file for main computations.

Download all foldings

Choose zipped file: or gzipped tar file:   PostScriptPDFpngjpgctViennaRNAMLRnaViz ctMac ct RNAdrawXRNA ss  

View ss-count information

(Definition)   (ss-count file)  ss value = 2.67 ± 3.26

Averaging window   13579 1113151719 25517599   Magnification   Base to magnify about   Plot format   PostScriptPDFpngjpg  

View Individual Structures:

Circular structure Plots

◈ Structure 1 : Initial ΔG = -132.00 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 2 : Initial ΔG = -131.90 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 3 : Initial ΔG = -129.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 4 : Initial ΔG = -129.10 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 5 : Initial ΔG = -127.40 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 6 : Initial ΔG = -126.90 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 7 : Initial ΔG = -126.60 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 8 : Initial ΔG = -125.90 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

Dot plot folding comparisons for dna_2353:
Image format: PostScriptpngjpg
Compare selected foldings:     1   2   3   4   5   6   7   8   All
     

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These computations were performed on ip-172-31-2-102 in 1 min. and 27.12 sec. and can be accessed at http://www.unafold.org/cgi-bin/view.cgi?26Apr21-06-43-06
The results will be erased in 6 hours..