26Apr21-07-13-43 is the 493831st nucleic acid sequence folded on the Amazon hosted mfold server. - Tuesday, April 21 07:13:48 UTC 2026 -

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Folding 26Apr21-07-13-43 at 37° C. (3.6)
- Computed for 133.6.23.1 -

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Linear RNA folding at 5%, window = 15, max folds = 50 245 A's, 306 C's, 319 G's, 243 U/T's and 0 N's. 10 20 30 40 50 AGCCCUAGCU ACAACAAUCU AAUCUAUCUC UGCUUCCAAU UCCCAUACAA 60 70 80 90 100 AGCUAGAGCU AACUCUGAGU UAAACUGCGA CAUUACACAA UGAGGCUUCA 110 120 130 140 150 CCAUCUGCAU GUGGCCUACC UGGAUCACAA AGCGUCGUCG UCCUCGUCGU 160 170 180 190 200 CUCCGGCGCC ACCAUCCAUC UCCCCGUCGU CGAUCCCCGG AUCGGCCGCC 210 220 230 240 250 UUCCCUGCUU UCUCCUUCAA AUGCCUCCGC CCGCUCGCGC CCAAGAUCUC 260 270 280 290 300 GCUGCCGGAG CCGAGGAAGA UGAUCGCGCC GCCGGACUUC GUCGUCCCUC 310 320 330 340 350 GCGCCAGAAA CGCUUCCAAG CUGCUCAACU ACACUGUGCA GGUGCCGGCG 360 370 380 390 400 GCGGGGACGA CGAGGUGGAA CCCGUCGGCG GAGCAGAUAA AGGUGCUGGA 410 420 430 440 450 GAUGCUGUAC CGCGGCGGGA UGCGGACGCC GAACUCCGUC CAGAUCGAGC 460 470 480 490 500 GGAUCACGGA GGAGCUCGGC AAGUACGGCC GGAUCGAGGG CAAGAACGUC 510 520 530 540 550 UUCUACUGGU UCCAGAAUCA CAAGGCCCGC GAGCGCCAGA AGCAGAAGCG 560 570 580 590 600 CGCCGCCCUC CUCACCCUCA GCACGCUCGA CCCUUCCUUG CUGCCCGCUA 610 620 630 640 650 CCGCUAACGA AACCAAAGAG GCACCGGAGA AGAAGGAGAA GGACGUGGAA 660 670 680 690 700 GAUGGAUUGG CGAGCUGCAA GCGGCGGUGC AAGGCGUGGG GUGACGGCGC 710 720 730 740 750 CGGCGAUGGA GACGCGGUGG UGGCGACGGA GGCGGCCGGC GGCUGCACCG 760 770 780 790 800 ACGAAGUGAC CCUGGAGCUC UUCCCGUUGC AUCCCCAGGG AAAAGCUUAA 810 820 830 840 850 UUAGCUGCAU GUGCAUAUAU GUAUACUCCG UCGAUCGUCU GUCACGCAUG 860 870 880 890 900 GUAUCAUCAU GGAUUGGCCG GGUUGAUGUU GAUUGUGGAA AUUAAAUUCC 910 920 930 940 950 CUCGUCUUUG CGUGUGCAUU GUGUUGUAGU UGGUCGAUCG UGUGUUUGGA 960 970 980 990 1000 UUGCUUUGAA CAUAUAAUGC AUUGUGUUGU GGCCGGGUGC UUGAUCGGAA 1010 1020 1030 1040 1050 GAAUAUAAUC AGUAGUUCCA AACUGGAAUU AGCAGUUGCU CAUAUACAUG 1060 1070 1080 1090 1100 CAUGAAUGGU GUAGAGAUCA CGCAACUAUA UAUGCAAGGU UUGGAUAUGC 1110 1120 UAAUUAGGGC UUA

Output

The energy dot plot for 26Apr21-07-13-43. (Definition)
File formats: Text, PostScript, pdf, png, jpg

Computed Structures:   (File Formats)
The computed foldings contain 2419 base pairs out of 31876 (7.6%) in the energy dot plot.

Extra files:   sorted ct file;   h-num values;   p-num values;   log file for main computations.

Download all foldings

Choose zipped file: or gzipped tar file:   PostScriptPDFpngjpgctViennaRNAMLRnaViz ctMac ct RNAdrawXRNA ss  

View ss-count information

(Definition)   (ss-count file)  ss value = 14.32 ± 12.89

Averaging window   13579 1113151719 25517599   Magnification   Base to magnify about   Plot format   PostScriptPDFpngjpg  

View Individual Structures:

Circular structure Plots

◈ Structure 1 : Initial ΔG = -429.00 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 2 : Initial ΔG = -428.40 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 3 : Initial ΔG = -428.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 4 : Initial ΔG = -427.60 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 5 : Initial ΔG = -427.30 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 6 : Initial ΔG = -427.00 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 7 : Initial ΔG = -426.80 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 8 : Initial ΔG = -426.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 9 : Initial ΔG = -426.10 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 10 : Initial ΔG = -425.80 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 11 : Initial ΔG = -425.70 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 12 : Initial ΔG = -425.40 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 13 : Initial ΔG = -425.40 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 14 : Initial ΔG = -425.10 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 15 : Initial ΔG = -425.00 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 16 : Initial ΔG = -424.50 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 17 : Initial ΔG = -424.40 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 18 : Initial ΔG = -424.00 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 19 : Initial ΔG = -423.90 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 20 : Initial ΔG = -422.50 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 21 : Initial ΔG = -421.30 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 22 : Initial ΔG = -421.30 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 23 : Initial ΔG = -420.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 24 : Initial ΔG = -419.50 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 25 : Initial ΔG = -418.40 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 26 : Initial ΔG = -418.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 27 : Initial ΔG = -417.60 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 28 : Initial ΔG = -416.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 29 : Initial ΔG = -413.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 30 : Initial ΔG = -412.60 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 31 : Initial ΔG = -411.90 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 32 : Initial ΔG = -411.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 33 : Initial ΔG = -411.00 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 34 : Initial ΔG = -407.30 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 35 : Initial ΔG = -404.20 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 36 : Initial ΔG = -397.80 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 37 : Initial ΔG = -396.60 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

◈ Structure 38 : Initial ΔG = -393.50 kcal/mol, (Thermodynamic Details).
Different file formats: PostScript, pdf, png, jpg, .ct file, Vienna, RNAML, RnaViz ct, Mac ct, RNAdraw, XRNA ss.

Dot plot folding comparisons for 26Apr21-07-13-43:
Image format: PostScriptpngjpg
Compare selected foldings:     1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   33   34   35   36   37   38   All
     

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These computations were performed on ip-172-31-2-102 in 14 min. and 11.04 sec. and can be accessed at http://www.unafold.org/cgi-bin/view.cgi?26Apr21-07-13-43
The results will be erased in 6 hours..