The DINAMelt Server - free energy decomposition results for unnamed job 260420_003317
Loop Free-Energy Decomposition
ΔG = -5.9 kcal/mol ΔH = -71.2 kcal/mol ΔS = -210.6 e.u. Tm = 64.9°C
| Structural element | δδG | Information |
|---|---|---|
| External loop | +0.05 | 0 ss bases & 1 closing helices |
| Stack | -1.44 | External closing pair is A1-T34 |
| Stack | -1.28 | External closing pair is C2-G33 |
| Stack | -1.30 | External closing pair is T3-A32 |
| Stack | -2.17 | External closing pair is C4-G31 |
| Stack | -2.24 | External closing pair is G5-C30 |
| Helix | -8.43 | 6 base pairs |
| Bulge loop | +3.90 | External closing pair is C6-G29 |
| Stack | -1.44 | External closing pair is G7-C19 |
| Stack | -1.45 | External closing pair is T8-A18 |
| Stack | -1.30 | External closing pair is G9-C17 |
| Helix | -4.19 | 4 base pairs |
| Hairpin loop | +2.80 | Closing pair is A10-T16 |