The DINAMelt Server - free energy decomposition results for unnamed job 260420_033434

Loop Free-Energy Decomposition

Dimer 1

ΔG = -4.5 kcal/mol ΔH = -31.0 kcal/mol ΔS = -89.0 e.u. Tm = -22.8°C

Structural elementδδGInformation
External loop+0.1022 ss bases & 1 closing helices
Stack-1.14External closing pair is T23-A35
Stack-1.44External closing pair is T24-A34
Stack-2.36External closing pair is C25-G33
Helix-4.934 base pairs
External loop+0.39Closing pair is G26-C32

Dimer 2

ΔG = -3.9 kcal/mol ΔH = -25.3 kcal/mol ΔS = -71.7 e.u. Tm = -35.5°C

Structural elementδδGInformation
External loop-0.8628 ss bases & 1 closing helices
Stack-1.58External closing pair is A27-T33
Stack-1.40External closing pair is C28-G32
Stack-1.14External closing pair is T29-A31
Helix-4.114 base pairs
External loop+1.04Closing pair is T30-A30

Dimer 3

ΔG = -3.6 kcal/mol ΔH = -31.7 kcal/mol ΔS = -94.3 e.u. Tm = -27.6°C

Structural elementδδGInformation
External loop-1.3518 ss bases & 1 closing helices
Stack-1.58External closing pair is G13-C29
Stack-1.14External closing pair is T14-A28
Stack-1.14External closing pair is T15-A27
Helix-3.854 base pairs
External loop+1.61Closing pair is T16-A26

Dimer 4

ΔG = -3.2 kcal/mol ΔH = -34.8 kcal/mol ΔS = -105.9 e.u. Tm = -25.8°C

Structural elementδδGInformation
External loop-1.0545 ss bases & 1 closing helices
Stack-1.44External closing pair is G26-C15
Stack-1.58External closing pair is A27-T14
Helix-3.013 base pairs
External loop+0.84Closing pair is C28-G13

Dimer 5

ΔG = -2.8 kcal/mol ΔH = -23.8 kcal/mol ΔS = -70.6 e.u. Tm = -47.3°C

Structural elementδδGInformation
External loop-1.2646 ss bases & 1 closing helices
Stack-1.40External closing pair is C28-G16
Stack-1.14External closing pair is T29-A15
Helix-2.543 base pairs
External loop+1.04Closing pair is T30-A14

Dimer 6

ΔG = -3.2 kcal/mol ΔH = -22.6 kcal/mol ΔS = -65.2 e.u. Tm = -40.8°C

Structural elementδδGInformation
External loop-1.5533 ss bases & 1 closing helices
Stack-2.36External closing pair is C25-G26
Helix-2.362 base pairs
External loop+0.76Closing pair is G26-C25

Dimer 7

ΔG = -4.6 kcal/mol ΔH = -35.1 kcal/mol ΔS = -102.5 e.u. Tm = -17.4°C

Structural elementδδGInformation
External loop-0.0123 ss bases & 1 closing helices
Stack-1.14External closing pair is T23-A34
Stack-1.44External closing pair is T24-A33
Stack-2.36External closing pair is C25-G32
Helix-4.934 base pairs
External loop+0.39Closing pair is G26-C31

Dimer 8

ΔG = -3.6 kcal/mol ΔH = -27.2 kcal/mol ΔS = -79.3 e.u. Tm = -34.7°C

Structural elementδδGInformation
External loop-1.0938 ss bases & 1 closing helices
Stack-2.36External closing pair is C25-G21
Helix-2.362 base pairs
External loop-0.11Closing pair is G26-C20

Dimer 9

ΔG = -3.2 kcal/mol ΔH = -47.1 kcal/mol ΔS = -147.3 e.u. Tm = -14.5°C

Structural elementδδGInformation
External loop-1.2324 ss bases & 1 closing helices
Stack-0.99External closing pair is A21-T31
Stack-1.14External closing pair is T22-A30
Helix-2.133 base pairs
Interior loop+1.27External closing pair is T23-A29
Stack-0.48External closing pair is C25-G27
Stack+0.41External closing pair is G26-T26
Stack-1.58External closing pair is A27-T25
Helix-1.654 base pairs
External loop+0.55Closing pair is C28-G24

Dimer 10

ΔG = -7.3 kcal/mol ΔH = -100.1 kcal/mol ΔS = -311.2 e.u. Tm = 16.2°C

Structural elementδδGInformation
External loop-0.7530 ss bases & 1 closing helices
Stack-0.99External closing pair is A21-T25
Stack-1.14External closing pair is T22-A24
Stack-1.14External closing pair is T23-A23
Helix-3.264 base pairs
Interior loop+2.02External closing pair is T24-A22
Stack-1.44External closing pair is G26-C19
Stack-1.58External closing pair is A27-T18
Helix-3.013 base pairs
Bulge loop+2.58External closing pair is C28-G17
Stack-1.14External closing pair is T30-A16
Stack-1.44External closing pair is T31-A15
Stack-1.59External closing pair is C32-G14
Stack-1.58External closing pair is A33-T13
Helix-5.745 base pairs
External loop+0.84Closing pair is C34-G12

Dimer 11

ΔG = -6.8 kcal/mol ΔH = -45.0 kcal/mol ΔS = -128.0 e.u. Tm = 3.2°C

Structural elementδδGInformation
External loop-1.0933 ss bases & 1 closing helices
Stack-2.36External closing pair is C25-G26
Stack-1.44External closing pair is G26-C25
Stack-1.58External closing pair is A27-T24
Stack-1.40External closing pair is C28-G23
Helix-6.785 base pairs
External loop+1.04Closing pair is T29-A22

Dimer 12

ΔG = -2.9 kcal/mol ΔH = -29.5 kcal/mol ΔS = -89.2 e.u. Tm = -35.2°C

Structural elementδδGInformation
External loop-0.7733 ss bases & 1 closing helices
Stack-1.40External closing pair is C11-G12
Stack-1.59External closing pair is T12-A11
Helix-2.993 base pairs
External loop+0.85Closing pair is G13-C10

Dimer 13

ΔG = -1.7 kcal/mol ΔH = -14.6 kcal/mol ΔS = -43.3 e.u. Tm = -86.2°C

Structural elementδδGInformation
External loop-1.1730 ss bases & 1 closing helices
Stack-0.99External closing pair is A21-T25
Stack-1.14External closing pair is T22-A24
Helix-2.133 base pairs
External loop+1.61Closing pair is T23-A23

Dimer 14

ΔG = -3.5 kcal/mol ΔH = -25.7 kcal/mol ΔS = -74.5 e.u. Tm = -37.9°C

Structural elementδδGInformation
External loop-2.0031 ss bases & 1 closing helices
Stack-1.40External closing pair is C28-G31
Stack-1.14External closing pair is T29-A30
Helix-2.543 base pairs
External loop+1.04Closing pair is T30-A29

Dimer 15

ΔG = -3.7 kcal/mol ΔH = -31.0 kcal/mol ΔS = -91.6 e.u. Tm = -27.9°C

Structural elementδδGInformation
External loop-1.5016 ss bases & 1 closing helices
Stack-1.40External closing pair is C11-G29
Stack-1.59External closing pair is T12-A28
Helix-2.993 base pairs
External loop+0.80Closing pair is G13-C27

Dimer 16

ΔG = -5.4 kcal/mol ΔH = -56.2 kcal/mol ΔS = -170.5 e.u. Tm = 0.6°C

Structural elementδδGInformation
External loop-0.9241 ss bases & 1 closing helices
Stack-1.58External closing pair is A27-T20
Stack-1.40External closing pair is C28-G19
Stack-1.14External closing pair is T29-A18
Stack-1.14External closing pair is T30-A17
Helix-5.255 base pairs
Bulge loop+3.12External closing pair is T31-A16
Stack-1.59External closing pair is C32-G13
Stack-1.58External closing pair is A33-T12
Helix-3.173 base pairs
External loop+0.84Closing pair is C34-G11

Dimer 17

ΔG = -3.1 kcal/mol ΔH = -25.3 kcal/mol ΔS = -74.6 e.u. Tm = -41.8°C

Structural elementδδGInformation
External loop-1.0948 ss bases & 1 closing helices
Stack-2.36External closing pair is C25-G11
Helix-2.362 base pairs
External loop+0.39Closing pair is G26-C10

Dimer 18

ΔG = -3.8 kcal/mol ΔH = -25.4 kcal/mol ΔS = -72.3 e.u. Tm = -35.9°C

Structural elementδδGInformation
External loop-1.5531 ss bases & 1 closing helices
Stack-2.36External closing pair is C25-G28
Stack-1.44External closing pair is G26-C27
Helix-3.803 base pairs
External loop+1.50Closing pair is A27-T26

Dimer 19

ΔG = -4.2 kcal/mol ΔH = -48.4 kcal/mol ΔS = -148.3 e.u. Tm = -8.8°C

Structural elementδδGInformation
External loop-1.0433 ss bases & 1 closing helices
Stack-1.95External closing pair is C18-G19
Stack-1.40External closing pair is C19-G18
Stack-0.70External closing pair is T20-A17
Helix-4.054 base pairs
Bulge loop+3.38External closing pair is A21-T16
Stack-2.36External closing pair is C25-G15
Helix-2.362 base pairs
External loop-0.11Closing pair is G26-C14

Dimer 20

ΔG = -8.3 kcal/mol ΔH = -68.2 kcal/mol ΔS = -201.0 e.u. Tm = 16.1°C

Structural elementδδGInformation
External loop-1.5022 ss bases & 1 closing helices
Stack-1.95External closing pair is C10-G22
Stack-1.40External closing pair is C11-G21
Stack-1.59External closing pair is T12-A20
Helix-4.944 base pairs
Interior loop+1.83External closing pair is G13-C19
Stack-1.14External closing pair is T15-A16
Stack-1.44External closing pair is T16-A15
Stack-1.95External closing pair is C17-G14
Helix-4.524 base pairs
External loop+0.85Closing pair is C18-G13

Dimer 21

ΔG = -3.6 kcal/mol ΔH = -31.7 kcal/mol ΔS = -94.3 e.u. Tm = -27.6°C

Structural elementδδGInformation
External loop-1.3521 ss bases & 1 closing helices
Stack-1.58External closing pair is G13-C26
Stack-1.14External closing pair is T14-A25
Stack-1.14External closing pair is T15-A24
Helix-3.854 base pairs
External loop+1.61Closing pair is T16-A23