The DINAMelt Server - free energy decomposition results for unnamed job 260420_034333

Loop Free-Energy Decomposition

Dimer 1

ΔG = -3.5 kcal/mol ΔH = -27.6 kcal/mol ΔS = -80.8 e.u. Tm = -34.3°C

Structural elementδδGInformation
External loop-2.0021 ss bases & 1 closing helices
Stack-2.36External closing pair is C20-G33
Helix-2.362 base pairs
External loop+0.85Closing pair is G21-C32

Dimer 2

ΔG = -3.3 kcal/mol ΔH = -24.8 kcal/mol ΔS = -72.2 e.u. Tm = -41.3°C

Structural elementδδGInformation
External loop-0.1827 ss bases & 1 closing helices
Stack-1.58External closing pair is A19-T26
Stack-2.36External closing pair is C20-G25
Helix-3.943 base pairs
External loop+0.85Closing pair is G21-C24

Dimer 3

ΔG = -5.9 kcal/mol ΔH = -36.6 kcal/mol ΔS = -103.1 e.u. Tm = -7.8°C

Structural elementδδGInformation
External loop-1.2326 ss bases & 1 closing helices
Stack-1.40External closing pair is A24-T32
Stack-1.44External closing pair is G25-C31
Stack-1.40External closing pair is A26-T30
Stack-1.58External closing pair is G27-C29
Helix-5.815 base pairs
External loop+1.19Closing pair is T28-A28

Dimer 4

ΔG = -3.6 kcal/mol ΔH = -37.7 kcal/mol ΔS = -114.4 e.u. Tm = -20.4°C

Structural elementδδGInformation
External loop-1.5932 ss bases & 1 closing helices
Stack-1.58External closing pair is G27-C29
Stack-0.70External closing pair is T28-A28
Stack-1.14External closing pair is A29-T27
Helix-3.424 base pairs
External loop+1.40Closing pair is A30-T26

Dimer 5

ΔG = -4.9 kcal/mol ΔH = -62.7 kcal/mol ΔS = -193.9 e.u. Tm = 1.0°C

Structural elementδδGInformation
External loop-0.9727 ss bases & 1 closing helices
Stack-1.44External closing pair is G25-C32
Stack-1.40External closing pair is A26-T31
Stack-1.58External closing pair is G27-C30
Helix-4.414 base pairs
Bulge loop+3.27External closing pair is T28-A29
Stack-1.40External closing pair is A30-T28
Stack-1.44External closing pair is G31-C27
Stack-0.99External closing pair is A32-T26
Helix-3.834 base pairs
External loop+1.04Closing pair is T33-A25

Dimer 6

ΔG = -3.6 kcal/mol ΔH = -27.2 kcal/mol ΔS = -79.3 e.u. Tm = -34.7°C

Structural elementδδGInformation
External loop-2.0028 ss bases & 1 closing helices
Stack-2.36External closing pair is C20-G26
Helix-2.362 base pairs
External loop+0.80Closing pair is G21-C25

Dimer 7

ΔG = -3.5 kcal/mol ΔH = -27.6 kcal/mol ΔS = -80.8 e.u. Tm = -34.3°C

Structural elementδδGInformation
External loop-2.0022 ss bases & 1 closing helices
Stack-2.36External closing pair is C20-G32
Helix-2.362 base pairs
External loop+0.85Closing pair is G21-C31

Dimer 8

ΔG = -3.8 kcal/mol ΔH = -15.8 kcal/mol ΔS = -40.3 e.u. Tm = -54.8°C

Structural elementδδGInformation
External loop-0.2831 ss bases & 1 closing helices
Stack-1.58External closing pair is A19-T22
Stack-2.36External closing pair is C20-G21
Stack-1.58External closing pair is G21-C20
Helix-5.524 base pairs
External loop+2.02Closing pair is T22-A19

Dimer 9

ΔG = -3.9 kcal/mol ΔH = -37.0 kcal/mol ΔS = -111.2 e.u. Tm = -19.6°C

Structural elementδδGInformation
External loop-0.6035 ss bases & 1 closing helices
Stack-1.58External closing pair is A19-T18
Stack-2.36External closing pair is C20-G17
Helix-3.943 base pairs
Interior loop+1.70External closing pair is G21-C16
Stack-1.40External closing pair is A24-T13
Helix-1.402 base pairs
External loop+0.39Closing pair is G25-C12

Dimer 10

ΔG = -6.7 kcal/mol ΔH = -44.5 kcal/mol ΔS = -126.8 e.u. Tm = 2.2°C

Structural elementδδGInformation
External loop-2.0038 ss bases & 1 closing helices
Stack-1.59External closing pair is C18-G14
Stack-1.58External closing pair is A19-T13
Stack-2.36External closing pair is C20-G12
Helix-5.534 base pairs
External loop+0.85Closing pair is G21-C11

Dimer 11

ΔG = -4.8 kcal/mol ΔH = -38.5 kcal/mol ΔS = -113.1 e.u. Tm = -12.8°C

Structural elementδδGInformation
External loop-1.1725 ss bases & 1 closing helices
Stack-1.40External closing pair is A24-T33
Stack-1.44External closing pair is G25-C32
Stack-1.40External closing pair is A26-T31
Helix-4.244 base pairs
External loop+0.63Closing pair is G27-C30

Dimer 12

ΔG = -4.7 kcal/mol ΔH = -31.7 kcal/mol ΔS = -90.5 e.u. Tm = -20.2°C

Structural elementδδGInformation
External loop-1.5942 ss bases & 1 closing helices
Stack-1.44External closing pair is G25-C17
Stack-1.40External closing pair is A26-T16
Stack-1.58External closing pair is G27-C15
Helix-4.414 base pairs
External loop+1.29Closing pair is T28-A14

Dimer 13

ΔG = -4.4 kcal/mol ΔH = -31.6 kcal/mol ΔS = -91.4 e.u. Tm = -22.6°C

Structural elementδδGInformation
External loop-0.7530 ss bases & 1 closing helices
Stack-1.14External closing pair is A29-T33
Stack-1.40External closing pair is A30-T32
Stack-1.44External closing pair is G31-C31
Stack-0.99External closing pair is A32-T30
Helix-4.965 base pairs
External loop+1.35Closing pair is T33-A29

Dimer 14

ΔG = -3.6 kcal/mol ΔH = -56.7 kcal/mol ΔS = -178.1 e.u. Tm = -6.8°C

Structural elementδδGInformation
External loop+0.0326 ss bases & 1 closing helices
Stack-1.14External closing pair is T22-A30
Stack-0.70External closing pair is T23-A29
Stack-1.40External closing pair is A24-T28
Helix-3.244 base pairs
Interior loop+0.98External closing pair is G25-C27
Stack-1.58External closing pair is G27-C24
Stack-0.70External closing pair is T28-A23
Helix-2.283 base pairs
Interior loop+1.98External closing pair is A29-T22
Stack-1.44External closing pair is G31-C20
Stack-0.99External closing pair is A32-T19
Helix-2.433 base pairs
External loop+1.35Closing pair is T33-A18

Dimer 15

ΔG = -3.0 kcal/mol ΔH = -25.6 kcal/mol ΔS = -75.6 e.u. Tm = -41.3°C

Structural elementδδGInformation
External loop-1.3723 ss bases & 1 closing helices
Stack-1.58External closing pair is G21-C32
Stack-1.14External closing pair is T22-A31
Helix-2.713 base pairs
External loop+1.03Closing pair is T23-A30

Dimer 16

ΔG = -7.5 kcal/mol ΔH = -60.3 kcal/mol ΔS = -177.2 e.u. Tm = 11.3°C

Structural elementδδGInformation
External loop-1.0427 ss bases & 1 closing helices
Stack-1.59External closing pair is C16-G23
Stack-1.58External closing pair is A17-T22
Stack-1.59External closing pair is C18-G21
Stack-1.58External closing pair is A19-T20
Helix-6.345 base pairs
Interior loop+0.33External closing pair is C20-G19
Stack-1.14External closing pair is T22-A17
Helix-1.142 base pairs
External loop+0.72Closing pair is T23-A16

Dimer 17

ΔG = -4.7 kcal/mol ΔH = -35.9 kcal/mol ΔS = -104.8 e.u. Tm = -15.9°C

Structural elementδδGInformation
External loop-0.9736 ss bases & 1 closing helices
Stack-1.44External closing pair is G25-C23
Stack-1.40External closing pair is A26-T22
Stack-1.58External closing pair is G27-C21
Helix-4.414 base pairs
External loop+0.72Closing pair is T28-A20

Dimer 18

ΔG = -3.6 kcal/mol ΔH = -27.2 kcal/mol ΔS = -79.3 e.u. Tm = -34.7°C

Structural elementδδGInformation
External loop-2.0026 ss bases & 1 closing helices
Stack-2.36External closing pair is C20-G28
Helix-2.362 base pairs
External loop+0.80Closing pair is G21-C27

Dimer 19

ΔG = -6.8 kcal/mol ΔH = -56.2 kcal/mol ΔS = -165.6 e.u. Tm = 7.3°C

Structural elementδδGInformation
External loop-1.0430 ss bases & 1 closing helices
Stack-1.95External closing pair is C15-G19
Helix-1.952 base pairs
Interior loop+1.64External closing pair is C16-G18
Stack-1.58External closing pair is A19-T16
Stack-2.36External closing pair is C20-G15
Stack-1.58External closing pair is G21-C14
Stack-1.14External closing pair is T22-A13
Helix-6.655 base pairs
External loop+1.19Closing pair is T23-A12

Dimer 20

ΔG = -6.9 kcal/mol ΔH = -45.2 kcal/mol ΔS = -128.4 e.u. Tm = 3.8°C

Structural elementδδGInformation
External loop-2.0020 ss bases & 1 closing helices
Stack-1.59External closing pair is C18-G32
Stack-1.58External closing pair is A19-T31
Stack-2.36External closing pair is C20-G30
Helix-5.534 base pairs
External loop+0.63Closing pair is G21-C29

Dimer 21

ΔG = -4.6 kcal/mol ΔH = -42.5 kcal/mol ΔS = -127.2 e.u. Tm = -10.7°C

Structural elementδδGInformation
External loop-1.2621 ss bases & 1 closing helices
Stack-0.48External closing pair is C20-G33
Stack+0.10External closing pair is G21-T32
Stack-1.14External closing pair is T22-A31
Stack-0.70External closing pair is T23-A30
Helix-2.225 base pairs
Interior loop+0.69External closing pair is A24-T29
Stack-1.40External closing pair is A26-T27
Stack-1.58External closing pair is G27-C26
Helix-2.983 base pairs
External loop+1.19Closing pair is T28-A25