The DINAMelt Server - free energy decomposition results for unnamed job 260420_042755

Loop Free-Energy Decomposition

Dimer 1

ΔG = -3.5 kcal/mol ΔH = -34.7 kcal/mol ΔS = -104.6 e.u. Tm = -19.1°C

Structural elementδδGInformation
External loop-0.8628 ss bases & 1 closing helices
Stack-1.14External closing pair is A15-T21
Stack-1.40External closing pair is A16-T20
Helix-2.543 base pairs
Interior loop+0.96External closing pair is G17-C19
Stack-1.40External closing pair is C19-G17
Stack-1.14External closing pair is T20-A16
Helix-2.543 base pairs
External loop+1.44Closing pair is T21-A15

Dimer 2

ΔG = -2.6 kcal/mol ΔH = -28.0 kcal/mol ΔS = -85.2 e.u. Tm = -39.7°C

Structural elementδδGInformation
External loop-1.0532 ss bases & 1 closing helices
Stack-2.40External closing pair is G28-C30
Helix-2.402 base pairs
External loop+0.84Closing pair is C29-G29

Dimer 3

ΔG = -5.9 kcal/mol ΔH = -44.6 kcal/mol ΔS = -129.8 e.u. Tm = -2.1°C

Structural elementδδGInformation
External loop-1.3749 ss bases & 1 closing helices
Stack-2.40External closing pair is G28-C13
Stack-1.40External closing pair is C29-G12
Stack-1.59External closing pair is T30-A11
Helix-5.394 base pairs
External loop+0.85Closing pair is G31-C10

Dimer 4

ΔG = -4.2 kcal/mol ΔH = -39.6 kcal/mol ΔS = -118.7 e.u. Tm = -15.2°C

Structural elementδδGInformation
External loop-1.0414 ss bases & 1 closing helices
Stack-1.44External closing pair is G14-C34
Stack-1.14External closing pair is A15-T33
Stack-1.40External closing pair is A16-T32
Helix-3.974 base pairs
External loop+0.80Closing pair is G17-C31

Dimer 5

ΔG = -5.8 kcal/mol ΔH = -43.8 kcal/mol ΔS = -127.5 e.u. Tm = -3.2°C

Structural elementδδGInformation
External loop-0.9718 ss bases & 1 closing helices
Stack-1.58External closing pair is G17-C33
Stack-1.44External closing pair is T18-A32
Stack-1.40External closing pair is C19-G31
Stack-1.14External closing pair is T20-A30
Helix-5.555 base pairs
External loop+0.72Closing pair is T21-A29

Dimer 6

ΔG = -4.0 kcal/mol ΔH = -31.7 kcal/mol ΔS = -92.8 e.u. Tm = -24.7°C

Structural elementδδGInformation
External loop-0.7512 ss bases & 1 closing helices
Stack-1.58External closing pair is G12-C34
Stack-1.59External closing pair is T13-A33
Helix-3.173 base pairs
External loop-0.11Closing pair is G14-C32

Dimer 7

ΔG = -4.2 kcal/mol ΔH = -32.9 kcal/mol ΔS = -96.3 e.u. Tm = -22.2°C

Structural elementδδGInformation
External loop-1.0531 ss bases & 1 closing helices
Stack-2.40External closing pair is G28-C31
Stack-1.40External closing pair is C29-G30
Helix-3.803 base pairs
External loop+0.66Closing pair is T30-A29

Dimer 8

ΔG = -4.2 kcal/mol ΔH = -40.0 kcal/mol ΔS = -120.2 e.u. Tm = -15.0°C

Structural elementδδGInformation
External loop-1.0421 ss bases & 1 closing helices
Stack-1.44External closing pair is G14-C27
Stack-1.14External closing pair is A15-T26
Stack-1.40External closing pair is A16-T25
Helix-3.974 base pairs
External loop+0.85Closing pair is G17-C24

Dimer 9

ΔG = -5.9 kcal/mol ΔH = -44.6 kcal/mol ΔS = -129.8 e.u. Tm = -2.1°C

Structural elementδδGInformation
External loop-1.3745 ss bases & 1 closing helices
Stack-2.40External closing pair is G28-C17
Stack-1.40External closing pair is C29-G16
Stack-1.59External closing pair is T30-A15
Helix-5.394 base pairs
External loop+0.85Closing pair is G31-C14

Dimer 10

ΔG = -4.4 kcal/mol ΔH = -33.8 kcal/mol ΔS = -98.7 e.u. Tm = -20.0°C

Structural elementδδGInformation
External loop-1.3713 ss bases & 1 closing helices
Stack-1.58External closing pair is G12-C33
Stack-1.59External closing pair is T13-A32
Helix-3.173 base pairs
External loop+0.17Closing pair is G14-C31

Dimer 11

ΔG = -5.8 kcal/mol ΔH = -42.8 kcal/mol ΔS = -124.2 e.u. Tm = -4.0°C

Structural elementδδGInformation
External loop-1.1712 ss bases & 1 closing helices
Stack-0.99External closing pair is A3-T25
Stack-1.14External closing pair is T4-A24
Stack-1.44External closing pair is T5-A23
Stack-1.95External closing pair is C6-G22
Helix-5.515 base pairs
External loop+0.92Closing pair is C7-G21

Dimer 12

ΔG = -4.8 kcal/mol ΔH = -34.7 kcal/mol ΔS = -100.2 e.u. Tm = -16.1°C

Structural elementδδGInformation
External loop-0.6026 ss bases & 1 closing helices
Stack-2.36External closing pair is C27-G35
Stack-2.40External closing pair is G28-C34
Helix-4.763 base pairs
External loop+0.55Closing pair is C29-G33