The DINAMelt Server - free energy decomposition results for unnamed job 260420_044114

Loop Free-Energy Decomposition

Dimer 1

ΔG = -3.3 kcal/mol ΔH = -28.8 kcal/mol ΔS = -85.6 e.u. Tm = -28.4°C

Structural elementδδGInformation
External loop-1.5933 ss bases & 1 closing helices
Stack-2.40External closing pair is G12-C13
Helix-2.402 base pairs
External loop+0.72Closing pair is C13-G12

Dimer 2

ΔG = -2.9 kcal/mol ΔH = -26.7 kcal/mol ΔS = -79.7 e.u. Tm = -39.9°C

Structural elementδδGInformation
External loop-1.5032 ss bases & 1 closing helices
Stack-1.59External closing pair is C26-G28
Stack-0.99External closing pair is A27-T27
Helix-2.583 base pairs
External loop+1.14Closing pair is T28-A26

Dimer 3

ΔG = -3.9 kcal/mol ΔH = -25.2 kcal/mol ΔS = -71.5 e.u. Tm = -36.1°C

Structural elementδδGInformation
External loop-0.6031 ss bases & 1 closing helices
Stack-1.40External closing pair is A11-T14
Stack-2.40External closing pair is G12-C13
Helix-3.803 base pairs
External loop+0.53Closing pair is C13-G12

Dimer 4

ΔG = -2.3 kcal/mol ΔH = -20.7 kcal/mol ΔS = -61.9 e.u. Tm = -58.9°C

Structural elementδδGInformation
External loop-2.0027 ss bases & 1 closing helices
Stack-1.40External closing pair is C15-G22
Helix-1.402 base pairs
External loop+1.14Closing pair is T16-A21

Dimer 5

ΔG = -4.3 kcal/mol ΔH = -55.3 kcal/mol ΔS = -171.0 e.u. Tm = -4.4°C

Structural elementδδGInformation
External loop-1.2626 ss bases & 1 closing helices
Stack-1.59External closing pair is C13-G21
Stack-1.58External closing pair is A14-T20
Stack-1.40External closing pair is C15-G19
Helix-4.574 base pairs
Bulge loop+3.54External closing pair is T16-A18
Stack-1.59External closing pair is C17-G13
Stack-1.58External closing pair is A18-T12
Helix-3.173 base pairs
External loop+1.14Closing pair is C19-G11

Dimer 6

ΔG = -1.6 kcal/mol ΔH = -17.5 kcal/mol ΔS = -53.4 e.u. Tm = -74.7°C

Structural elementδδGInformation
External loop-0.8541 ss bases & 1 closing helices
Stack-1.58External closing pair is A23-T16
Helix-1.582 base pairs
External loop+0.85Closing pair is C24-G15

Dimer 7

ΔG = -3.7 kcal/mol ΔH = -28.8 kcal/mol ΔS = -84.3 e.u. Tm = -31.2°C

Structural elementδδGInformation
External loop-1.5929 ss bases & 1 closing helices
Stack-2.40External closing pair is G12-C17
Helix-2.402 base pairs
External loop+0.31Closing pair is C13-G16

Dimer 8

ΔG = -5.5 kcal/mol ΔH = -46.6 kcal/mol ΔS = -137.8 e.u. Tm = -3.1°C

Structural elementδδGInformation
External loop-1.0435 ss bases & 1 closing helices
Stack-1.95External closing pair is C20-G19
Stack-1.40External closing pair is C21-G18
Stack-0.70External closing pair is T22-A17
Stack-1.58External closing pair is A23-T16
Helix-5.635 base pairs
External loop+1.14Closing pair is C24-G15

Dimer 9

ΔG = -5.8 kcal/mol ΔH = -42.8 kcal/mol ΔS = -124.2 e.u. Tm = -4.0°C

Structural elementδδGInformation
External loop-1.1712 ss bases & 1 closing helices
Stack-0.99External closing pair is A3-T25
Stack-1.14External closing pair is T4-A24
Stack-1.44External closing pair is T5-A23
Stack-1.95External closing pair is C6-G22
Helix-5.515 base pairs
External loop+0.92Closing pair is C7-G21

Dimer 10

ΔG = -3.2 kcal/mol ΔH = -25.7 kcal/mol ΔS = -75.5 e.u. Tm = -40.1°C

Structural elementδδGInformation
External loop-0.7012 ss bases & 1 closing helices
Stack-2.40External closing pair is G12-C34
Stack-1.59External closing pair is C13-G33
Helix-3.993 base pairs
External loop+1.50Closing pair is A14-T32