The DINAMelt Server - free energy decomposition results for unnamed job 260420_044428

Loop Free-Energy Decomposition

Dimer 1

ΔG = -4.2 kcal/mol ΔH = -43.6 kcal/mol ΔS = -132.0 e.u. Tm = -7.3°C

Structural elementδδGInformation
External loop-1.3531 ss bases & 1 closing helices
Stack-1.44External closing pair is G28-C31
Stack-0.99External closing pair is A29-T30
Stack-1.44External closing pair is T30-A29
Helix-3.864 base pairs
External loop+0.96Closing pair is C31-G28

Dimer 2

ΔG = -4.4 kcal/mol ΔH = -41.0 kcal/mol ΔS = -122.9 e.u. Tm = -13.1°C

Structural elementδδGInformation
External loop-1.0442 ss bases & 1 closing helices
Stack-1.44External closing pair is G28-C20
Stack-0.99External closing pair is A29-T19
Stack-1.44External closing pair is T30-A18
Helix-3.864 base pairs
External loop+0.55Closing pair is C31-G17

Dimer 3

ΔG = -3.6 kcal/mol ΔH = -24.4 kcal/mol ΔS = -69.6 e.u. Tm = -39.4°C

Structural elementδδGInformation
External loop-0.8639 ss bases & 1 closing helices
Stack-0.99External closing pair is A29-T24
Stack-1.44External closing pair is T30-A23
Stack-1.40External closing pair is C31-G22
Helix-3.834 base pairs
External loop+1.04Closing pair is T32-A21

Dimer 4

ΔG = -2.2 kcal/mol ΔH = -26.2 kcal/mol ΔS = -80.3 e.u. Tm = -45.6°C

Structural elementδδGInformation
External loop-0.4627 ss bases & 1 closing helices
Stack-1.59External closing pair is T27-A34
Stack-1.44External closing pair is G28-C33
Helix-3.033 base pairs
Interior loop+1.60External closing pair is A29-T32
Stack-1.40External closing pair is C31-G30
Helix-1.402 base pairs
External loop+1.04Closing pair is T32-A29

Dimer 5

ΔG = -1.8 kcal/mol ΔH = -23.0 kcal/mol ΔS = -71.2 e.u. Tm = -56.1°C

Structural elementδδGInformation
External loop-1.0441 ss bases & 1 closing helices
Stack-1.59External closing pair is C22-G15
Stack-1.14External closing pair is A23-T14
Helix-2.733 base pairs
External loop+1.99Closing pair is A24-T13

Dimer 6

ΔG = -3.4 kcal/mol ΔH = -27.4 kcal/mol ΔS = -80.6 e.u. Tm = -35.7°C

Structural elementδδGInformation
External loop-1.1727 ss bases & 1 closing helices
Stack-0.99External closing pair is A26-T33
Stack-1.59External closing pair is T27-A32
Helix-2.583 base pairs
External loop+0.39Closing pair is G28-C31

Dimer 7

ΔG = -4.8 kcal/mol ΔH = -34.3 kcal/mol ΔS = -99.0 e.u. Tm = -16.7°C

Structural elementδδGInformation
External loop-0.8537 ss bases & 1 closing helices
Stack-0.99External closing pair is A26-T23
Stack-1.59External closing pair is T27-A22
Stack-1.44External closing pair is G28-C21
Stack+0.10External closing pair is A29-T20
Stack+0.34External closing pair is T30-G19
Stack-1.40External closing pair is C31-G18
Helix-4.987 base pairs
External loop+1.04Closing pair is T32-A17

Dimer 8

ΔG = -6.0 kcal/mol ΔH = -73.2 kcal/mol ΔS = -225.5 e.u. Tm = 8.1°C

Structural elementδδGInformation
External loop-1.1712 ss bases & 1 closing helices
Stack-0.99External closing pair is A3-T25
Stack-1.14External closing pair is T4-A24
Stack-1.44External closing pair is T5-A23
Stack-1.95External closing pair is C6-G22
Helix-5.515 base pairs
Interior loop+5.39External closing pair is C7-G21
Stack-1.14External closing pair is T19-A16
Stack-1.44External closing pair is T20-A15
Stack-1.95External closing pair is C21-G14
Stack-1.59External closing pair is C22-G13
Helix-6.115 base pairs
External loop+1.43Closing pair is A23-T12

Dimer 9

ΔG = -4.4 kcal/mol ΔH = -41.0 kcal/mol ΔS = -122.9 e.u. Tm = -13.1°C

Structural elementδδGInformation
External loop-1.0442 ss bases & 1 closing helices
Stack-1.44External closing pair is G28-C20
Stack-0.99External closing pair is A29-T19
Stack-1.44External closing pair is T30-A18
Helix-3.864 base pairs
External loop+0.55Closing pair is C31-G17