The DINAMelt Server - free energy decomposition results for unnamed job 260421_022130
Loop Free-Energy Decomposition
ΔG = -23.4 kcal/mol ΔH = -154.0 kcal/mol ΔS = -420.9 e.u. Tm = 71.7°C
| Structural element | δδG | Information |
|---|---|---|
| External loop | -0.46 | 20 ss bases & 1 closing helices |
| Stack | -0.88 | External closing pair is A21-T20 |
| Stack | -1.30 | External closing pair is T22-A19 |
| Stack | -1.45 | External closing pair is C23-G18 |
| Stack | -0.88 | External closing pair is A24-T17 |
| Stack | -1.45 | External closing pair is T25-A16 |
| Stack | -1.44 | External closing pair is G26-C15 |
| Stack | -1.30 | External closing pair is T27-A14 |
| Stack | -2.17 | External closing pair is C28-G13 |
| Stack | -1.84 | External closing pair is G29-C12 |
| Stack | -1.30 | External closing pair is G30-C11 |
| Stack | -1.44 | External closing pair is A31-T10 |
| Stack | -1.84 | External closing pair is C32-G9 |
| Stack | -1.84 | External closing pair is C33-G8 |
| Stack | -1.84 | External closing pair is C34-G7 |
| Helix | -20.97 | 15 base pairs |
| Bulge loop | +1.83 | External closing pair is C35-G6 |
| Stack | -2.24 | External closing pair is G36-C4 |
| Stack | -2.17 | External closing pair is C37-G3 |
| Helix | -4.41 | 3 base pairs |
| External loop | +0.56 | Closing pair is G38-C2 |