The DINAMelt Server - free energy decomposition results for unnamed job 260421_065320
Loop Free-Energy Decomposition
ΔG = -21.6 kcal/mol ΔH = -163.3 kcal/mol ΔS = -456.9 e.u. Tm = 65.3°C
| Structural element | δδG | Information |
|---|---|---|
| External loop | -0.85 | 38 ss bases & 1 closing helices |
| Stack | -0.88 | External closing pair is A20-T36 |
| Stack | -1.00 | External closing pair is T21-A35 |
| Stack | -0.58 | External closing pair is T22-A34 |
| Stack | -1.44 | External closing pair is A23-T33 |
| Stack | -1.45 | External closing pair is C24-G32 |
| Stack | -1.28 | External closing pair is A25-T31 |
| Stack | -2.24 | External closing pair is G26-C30 |
| Stack | -1.28 | External closing pair is C27-G29 |
| Stack | -1.00 | External closing pair is T28-A28 |
| Stack | -1.45 | External closing pair is T29-A27 |
| Stack | -2.24 | External closing pair is G30-C26 |
| Stack | -1.28 | External closing pair is C31-G25 |
| Stack | -0.58 | External closing pair is T32-A24 |
| Stack | -1.44 | External closing pair is A33-T23 |
| Stack | -1.45 | External closing pair is C34-G22 |
| Stack | -1.44 | External closing pair is A35-T21 |
| Helix | -21.03 | 17 base pairs |
| Interior loop | +3.80 | External closing pair is C36-G20 |
| Stack | -2.24 | External closing pair is G47-C11 |
| Stack | -1.84 | External closing pair is C48-G10 |
| Helix | -4.08 | 3 base pairs |
| External loop | +0.56 | Closing pair is C49-G9 |